1. Home
  2. Mutant Lines
  3. 11-1671-1

11-1671-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1894490 [Map]; Strand: w
      • AT1G06190.1 - [+] show detail - Rho termination factor
        Distance: -342; Region: promoter
      • AT1G06190.2 - [+] show detail - Rho termination factor
        Distance: -342; Region: promoter
      • AT1G06200.1 - [+] show detail - Peptidase S24/S26A/S26B/S26C family protein
        Distance: 0; Region: exon5 (3UTR)
    Flanking Genome Sequence: 11-1671-1 - 3-prime edge 
    AATTTAGTTG TCATTGGAGG TGTTTGTGAC AAATGTTGGC CCGTTGGTAC 
    TTAAGCT

AT1G06190.1

Model type
Protein coding
Short Description
Rho termination factor
Computational Description
Rho termination factor; FUNCTIONS IN: transcription termination factor activity, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism, ATP binding; INVOLVED IN: transcription termination, ATP biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rho termination factor, N-terminal (InterPro:IPR011112), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757); BEST Arabidopsis thaliana protein match is: ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative mechanism (TAIR:AT2G31150.1); Has 1888 Blast hits to 1636 proteins in 313 species: Archae - 6; Bacteria - 275; Metazoa - 547; Fungi - 247; Plants - 133; Viruses - 50; Other Eukaryotes - 630 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G06190.2

Model type
Protein coding
Short Description
Rho termination factor
Computational Description
Rho termination factor; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism, ATP binding; INVOLVED IN: ATP biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757); BEST Arabidopsis thaliana protein match is: ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative mechanism (TAIR:AT2G31150.1); Has 63 Blast hits to 63 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 0; Plants - 41; Viruses - 3; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G06200.1

Model type
Protein coding
Short Description
Peptidase S24/S26A/S26B/S26C family protein
Computational Description
Peptidase S24/S26A/S26B/S26C family protein; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT2G31140.1); Has 259 Blast hits to 259 proteins in 81 species: Archae - 0; Bacteria - 8; Metazoa - 68; Fungi - 34; Plants - 130; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Link
InterPro Scan - TAIR