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11-1678-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1214976 [Map]; Strand: c
      • AT1G04470.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: -314; Region: promoter
    Flanking Genome Sequence: 11-1678-1 - 5-prime edge 
    TGCAAAAGTA TGTTGAGTAA CAAGTTTCCC AACAATGTNT TATGCTGGAT 
    TCTGTTGTCA ACAAAAGTGA GGTTGGATTT TGTTTTTCTC TCTCAAAAGA 
    TTGTGTATAT GGAAGAGAAT ACATATGGAA TTTACGAAAA ACAAGAGATT 
    CGGCTTGGCA AAAGTTACTT GGAATAGGAG ATTTGCTAAT TATGGTTAAG 
    TTTTCATGAG GCTTCCTCAT TTTACTCACA TCCTCTCTCC TTCCTTAGCA 
    CAGAGAAATT TGTTGTCGCC TAGCTTTTTC CAAGTTGTCT CTCGTCTTCC 
    TCCACCTCCT CATTTTTCTC TGTTTTTTTG TTCGTTGTCT CTCATTTTTC 
    CCTTATTAAA AACACATAAC TCCTTCTCTC TCCTCACTTC TCGGACATCT 
    GATTTCTTAA ACCCGTATCC GTCTGGTTTC TATTTCCTTC TTGCCTCCCC 
    TCCGTGATGG TTCGTCATTC TCGGAGGGAG TCCTTTTTCG ACATGGTTGG 
    CTTTGAGGTT TGTCCTGATA CCGATCTTCT TTGGCCATTC GGGAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1215092 [Map]; Strand: c
      • AT1G04470.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: -430; Region: promoter
    Flanking Genome Sequence: 11-1678-1 - 3-prime edge 
    CTTTTGCACC TGGTTGTTGT TGTAGTTGAT GTATCCGGAG AAAAGAAGAT 
    AAGATTCGGG TCAATACTTA ATCTCAATTC TGTCTGCAGC AGTTACTTAA 
    ACGGTGTCCT TTAATTGTTA ACTGGATAAC TATATTTTTT ATGATCTTAT 
    GATGGGATTT GTTTCAAACT TTCAATTAAG GTCAACTATA CATCAATCAA 
    GTGGCACTGG TCAGGACCTG ATCATTGATT CTTTCAGTTA TCTTTTAACT 
    TTGAGAAATA TGGAATCTCA TAATCCTCAA GCAATTTCAG ATTTTAGGAT 
    TCGACAAATA TTGCTAATCA AATTGAGTTC TATGAAAACA ACTATAACAG 
    AAGATTATGA AGAAATACAG TTATTACAAC TTACGACCAT GAAACTTGTA 
    CAAATAATGG ATTCACCAGA AACCAATCCA AATATCTTAT ATAACCTCAA 
    AGCT

AT1G04470.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF810)
Computational Description
CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT2G33420.1); Has 201 Blast hits to 187 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 4; Plants - 177; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Link
InterPro Scan - TAIR