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11-1720-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 222022 [Map]; Strand: c
      • AT4G00490.1 - [+] show detail - beta-amylase 2
        Distance: -298; Region: promoter
    Flanking Genome Sequence: 11-1720-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    AATACACTCG TGCAAGTACA ACAACACACT AAAGTTATTA AATAATAAAC 
    ACATTTGATG TAGATAAACT ACTTTTTTTA GTGACGTGAC TTTACAGGCC 
    CAATAATATA TTCTGAAAAG CCCATAGTAA TATTCACAAA AGCCCCTTGA 
    TAAAGTTGCA ACGCGCGTAC TTATCTGACG TGTCAGGTCA CGCCACGTGG 
    ATTAGAAAAA AGTGGTAAAA GACAAAACCC TTTTGTACTC AACGGATCTG 
    AGTGAATCCT GAAAACTTTT TTAGGATTTC AAAATTGATT TGAACCAACC 
    AATGATTCTT GGATC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 222029 [Map]; Strand: c
      • AT4G00490.1 - [+] show detail - beta-amylase 2
        Distance: -291; Region: promoter
    Flanking Genome Sequence: 11-1720-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT ACGAGTGTAT ATGAATTTAG AATAATACTA 
    TCTTAAACAA TCGGCTAAGC TATTTATAAT CTGTAAGATT GATACTAACG 
    ATGTAACATT AATGTATTAA TCCGAAGACA GTCGTGCATT GTAGTGGCAA 
    ATGTTGTATG TCAGATGTGT CGCGTCTGTA ATCAATGCGC TACGTCTCTC 
    TGTCTTAACA AAATCATTGA AGCT

AT4G00490.1

Model type
Protein coding
Short Description
beta-amylase 2
Curator Summary
Encodes a chloroplast beta-amylase. The enzyme activity is very weak compared to BAM1 and BAM3. Mutant of BAM2 has no visible phenotype.
Computational Description
beta-amylase 2 (BAM2); FUNCTIONS IN: beta-amylase activity; INVOLVED IN: carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-amylase 7 (TAIR:AT2G45880.1); Has 836 Blast hits to 835 proteins in 165 species: Archae - 0; Bacteria - 84; Metazoa - 0; Fungi - 0; Plants - 686; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).
Link
InterPro Scan - TAIR