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Mutant Lines
11-1753-1

11-1753-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 9696923 [Map]; Strand: w
- AT1G27840.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: -511; Region: promoter
- AT1G27840.2 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: -559; Region: promoter
- AT1G27840.3 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: -559; Region: promoter

GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCTA ATTGGAGTAA CGTTTAAAGC ATTTTTAACA 
CAATCAAACC TTTTGTTTTA TGGTCATCAA CTCTCTTAAT ATAGTAATCA 
AGACCAGGTT GGACAAAAAG CTATAACCAT AAAATACAAA AATGGAATAA 
AAGGTGATTT AGTTCACCTT TTGGTTAAAT TTTACAACTC ATATCGTTAT 
TCTTTAGACA ACTTTCGGTT TTAGTTTAGT TCGGTTGAAA ACCAAAAATT 
CGATTGTTTT TTTTTNGGTT TTNAAATNAA TTNAATTTTC NTAANCNTAA 
NGAAATNTGT NCAATANCCA AANAAANCTN CANATTNTNC AACTCGACCN 
TCCCCATGGN GGGGGNNAAG GGAGGGCNCC ANTNGGTAAA AAAAAACCCG 
NANCCCCCNG GGGTTNTCCN GCCCTNGGAA AAAAANCTAA AAAANGGAAA 
AAATNTAGGG ANACTTNGAT TNTTCGNCCC CGNANTAAAT AGGAAAAAAA 
ATCNANTTTN TTTNTTCGTN TTAAAAAAAT NGGAGTTANT TANCNGGGAC 
ACGTTCACTA AAAAAAANCC CTTTNGTNCC AAANCTTTTT TTAAAAAAAT 
TGNAAAANCT TATTCCAAGG GGGGAAAAAN AATTCTTANT AACTGGGNCC 
GGGGCTTCCN CCNTTNNNCC CCAANNGATG GGCCNTACAA TCGNTTTTNA 
TANGGGANGG GACCCTTNCC CNTTTTNTAA AAAAACCCCA CCCCGGCCCN

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 9696921 [Map]; Strand: w
  - AT1G27840.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
    Distance: -509; Region: promoter
  - AT1G27840.2 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
    Distance: -557; Region: promoter
  - AT1G27840.3 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
    Distance: -557; Region: promoter
Flanking Genome Sequence: 11-1753-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATGGA 
GTATACATTA TACGTAACAT ACCAACTATG TAAAACCGGG TCAGAACTTT 
TTTGTTTTAT TGCCGACAAC CGGGTCGGAT CGAAATGTCG A
```

AT1G27840.1

Model type: Protein coding
Short Description: Transducin/WD40 repeat-like superfamily protein
Curator Summary: Encodes a DDB1a interacting protein ATCSA-1 required for UV-B tolerance and genomic integrity.
Computational Description: ATCSA-1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G19750.1); Has 28727 Blast hits to 16574 proteins in 608 species: Archae - 26; Bacteria - 4830; Metazoa - 10091; Fungi - 6796; Plants - 3577; Viruses - 0; Other Eukaryotes - 3407 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G27840.2

Model type: Protein coding
Short Description: Transducin/WD40 repeat-like superfamily protein
Curator Summary: Encodes a DDB1a interacting protein ATCSA-1 required for UV-B tolerance and genomic integrity.
Computational Description: ATCSA-1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G19750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G27840.3

Model type: Protein coding
Short Description: Transducin/WD40 repeat-like superfamily protein
Curator Summary: Encodes a DDB1a interacting protein ATCSA-1 required for UV-B tolerance and genomic integrity.
Computational Description: ATCSA-1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G19750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR