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Mutant Lines
11-1775-1

11-1775-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 1350294 [Map]; Strand: w
- AT1G04810.1 - [+] show detail - 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
  Distance: 0; Region: exon1 (5UTR)

TTGCCAGTAA CCCACCGGCG GAACTAACCA TGGCGGCGGC CATTATCCTA 
ATCGGAAAAT TAGAAACCTA GAGGTGGAGA AGAAGAGTTG ATCAGACGGA 
GGAACACAAG AACCGAACTA CTTTGGGCGA GCACAATTTC TGAGTTCACT 
TTTTCACAAG TCTAATCAAA ATCGAAATTC TAGACTTATC GAATATTAAG 
ATACTTACCC AACAAGTCAA GTAATTTTTA CCAATACCCC TAAATGTTTA 
ATAAGATTAC ACTTTCACCC CAAATATATA TGATGGATC

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 1350410 [Map]; Strand: w
  - AT1G04810.1 - [+] show detail - 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 11-1775-1 - 5-prime edge
```
ACTGGCAATG CTCAACGAAC CCCATCCTTC CTTGAAACTT CACGCTCTCT 
CATATCTCAT CAGATTGGTT GACCAATTTT GGCCCGAGAT CTCCACTAGT 
GTCCCAATCA TGTATTCAAT TCTCTCTTCT CTTTTTTTTA ATTGTTTCCC 
TTCGTGAGGC TATTCTGTTT GCTTACTGGG AGTAAAGCT
```

AT1G04810.1

Model type: Protein coding
Short Description: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
Computational Description: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit; FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015), Armadillo-type fold (InterPro:IPR016024), 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (InterPro:IPR016642); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (TAIR:AT2G32730.1); Has 1171 Blast hits to 1071 proteins in 297 species: Archae - 14; Bacteria - 33; Metazoa - 390; Fungi - 382; Plants - 143; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink).
Link: InterPro Scan - TAIR