1. Home
  2. Mutant Lines
  3. 11-1779-1

11-1779-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24622571 [Map]; Strand: c
      • AT5G61200.3 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: exon7 (3UTR)
      • AT5G61210.1 - [+] show detail - soluble N-ethylmaleimide-sensitive factor adaptor protein 33
        Distance: -728; Region: promoter
    Flanking Genome Sequence: 11-1779-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTAN AATGCACATA CATGANGATA CAACAACGCT 
    TCAAGATTTC TTTATTTTCA CAAGAAAAAG AAGAATAATA AAAGAGAGAA 
    AAACGGGCCA TCAAATAAAC TCAGCCTTAT TGACCTAGGC TCATTACAGG 
    CCCATCAAAT AGAGTCAAAT AGTAAGAATC TTCTTGGTCA ACGACCACAG 
    CTTTCAACAT TCTCTAGAGA CTCATGTCAA TTTCTCAAGA TCTCTACATG 
    TTGCTGAAGG CGTAATTAAA CACTTAGAAG CCACATGAAG AAGCAGTTTC 
    ACTCTTGTAA AACTCAATTT CCATATATAA ACATAATCAC AGGGATGAAA 
    TCTATATTCC AATTTCCAAT CAAATTGGAT TATGTACACT TTAAATACAT 
    AAGAATT

AT5G61200.3

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT5G07890.3).
Link
InterPro Scan - TAIR

AT5G61210.1

Model type
Protein coding
Short Description
soluble N-ethylmaleimide-sensitive factor adaptor protein 33
Curator Summary
membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formation
Computational Description
soluble N-ethylmaleimide-sensitive factor adaptor protein 33 (SNAP33); FUNCTIONS IN: protein binding, SNAP receptor activity; INVOLVED IN: vesicle-mediated transport, response to other organism, cellular membrane fusion, response to mechanical stimulus, cytokinesis by cell plate formation; LOCATED IN: integral to membrane of membrane fraction, plasma membrane, chloroplast, cell plate; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNAP-25 (InterPro:IPR000928), Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: soluble N-ethylmaleimide-sensitive factor adaptor protein 30 (TAIR:AT1G13890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR