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11-1804-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 346841 [Map]; Strand: w
      • AT1G02000.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1804-1 - 5-prime edge 
    CGAGTCTCTA CGCTGCGACC AAGAAAGCTG GAGAAGAGAT TGCCCACACT 
    TACAACCACA TCTACGGGCT CTCTCTCACC GGCTTGAGGT TTTTCACGGT 
    GTACGGGCCG TGGGGAAGAC CTGACATGGC TTACTTCTTC TTCACCAGAG 
    ACATCCTCAA AGGGAAAGCT ATTTCGATCT TCGAAGGAGC CAATCACGGA 
    ACAGTGGCTA GGGATTTCAC ATACATCGAT GACATAGTGA AAGGATGTTT 
    GGGGGCTCTG GACACGGCGG AGAAGAGCAC AGGGAGTGGT GGCAAGAAGC 
    GGGGAGCGGC TCAGCTAAGG GTATTCAACC TGGGGAACAC ATCTCCGGTG 
    CCGGTGACTG ATCTTGTGAG TATATTGGAG AGATTGTTGA AAGTGAAAGC 
    CAAGAGGAAC ATGATGAAGC TGCCGAGGAA TGGTGATGTG CCCTTCACAC 
    ATGCTAATAT CAGTTCGGCA CAGAGAGAGT TTGGGTACAA ACCAAGCACG 
    GATTTGCAGA CTGGTCTAAA GAAGTTTGTG AGATGGTATC TTGGTTACTA 
    CAAGCAGGGG GGAAAGAAAG TTGCTGCTGC TGCTTGAATA TTGATAATTC 
    ACAAGATTCT TTANTGTATA GTGAGTGAGT GGATTGATAC NCNCCATAAA 
    GAANAGACAT GATTCATTCN ANATATATAT NCTTTACATT NGNTTCNGCT 
    TTGNANTNCN ANCTN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 346777 [Map]; Strand: w
      • AT1G02000.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1804-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    TGGAGACTCG CAGGCTGATC TGTTCTGTCT TTCTCAGAGA AGGGGACTTT 
    GGTGTTTAAA CCGTAGACGG AGCTAGACGA TGCCCACACG ATCGCCGGCT 
    GAGGATTAGC GGATTTACAG ACCTCGAGGA GGTTAACGAA ACCAGCGATG 
    TTGCTGTGAA CGTAGGAGCC GGGGTTCTCC ATGGCGTATC TGACACCAGC 
    TTGAGCGGCA AGATGCATGA CGTGAGTGAA AGGGACGACC TCGAAGAGCT 
    TCTTGAGGAG AGACAGATCG TTGATGTCTC CTTCAACGAT GAACACTCCG 
    CTTCTCTCGA GGAGGGCTTG TCGAGATCTC TTGAGAGAGG TGTCGTAGTA 
    ATCGTTGAAG TTGTCGAGGC CTAGAACGCC GTCGCCGCGT CGTTTAAGAG 
    CGGCAGAGAC GTGAGTCCCG ACGAAACCGG CGGCCCCGGT GACGAGAACG 
    GAGACGCCGT TGCGGGTGCG GACACGAGCG GAGGATCGGA CGCGTTTCTC 
    CCAGGCGGGA CCGCCCCAAG AGTAGGTGCG AAGAGAGCGG CGAGAGGAAT 
    CGGGATTGGA GATGGGAGAT CGGTAGAAGA AGATGAAGAG CAATCCGAAA 
    AAGACAAGGG ACCAAAAGGC AAGCT

AT1G02000.1

Model type
Protein coding
Short Description
UDP-D-glucuronate 4-epimerase 2
Curator Summary
UDP-D-glucuronate 4-epimerase
Computational Description
UDP-D-glucuronate 4-epimerase 2 (GAE2); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 3 (TAIR:AT4G00110.1); Has 43438 Blast hits to 43429 proteins in 2985 species: Archae - 785; Bacteria - 25993; Metazoa - 728; Fungi - 385; Plants - 1220; Viruses - 41; Other Eukaryotes - 14286 (source: NCBI BLink).
Link
InterPro Scan - TAIR