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Mutant Lines
11-1810-1

11-1810-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 5; Position: 3006694 [Map]; Strand: c
- AT5G09700.1 - [+] show detail - Glycosyl hydrolase family protein
  Distance: -1107; Region: intergenic
- AT5G09710.1 - [+] show detail - Magnesium transporter CorA-like family protein
  Distance: 1215; Region: intergenic

NGGATAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCATTGT TTTATTGTAA AGGCGGCATA CAAAATATTT 
ATTGAGTTTG TACATTAGAA ACCTTTGGTT ATTTTGATTA GATAAAATAT 
GTTTTGGGGT TTTCATCATA AATCTATTCA TATATAATAA TTAAATAAAA 
ATATACNGGT CAAAACATAG TTGTTCCTCA TACTTTTGAA AAATGTTATG 
TACGTACATG TATAATAATG TACGTACATC TTTGTTGGTG AGTTAAAATT 
GTTGAGAATA AACAAGATTT TAAACTAAAC CCTTAAACAT ACACGATAAT 
ATTGAGATAC ACGTACACGT ATACGACCGC TCTAAACAGT TACATCATAA 
AAATGTCTAA ATCACATAAA TCTAATACTA TGTACGTACA CAAAAATATT 
TGTTGGAACG TACATGGTAC AACATTAAAA TGAGTTTAAA AATTCTCTAA 
CCATTGTCTA CGAAAAAAAT TTAGTTTTAT TTTTTTGACA TCCAAATTAA 
GCTATTATGT AAGTTATATG TATGCTGTAT ATTTTAATAT AGATTATGCA 
TATATAATAT TTCAACGAAT CGTACTCTCA TTCATGTAAA ACCGATAAAT 
TGCACACCAT TACAATTCAT TTCACATCTA CCATGCCTAT ATGTATTCGN 
GTACGTAAAA CATTCATCTT TACATAATTC NCCANATATN TAATTANTAN 
NGTCCGTACA TATTCTTTGA NAANGNACGA GNGGAC

3 prime edge [+] show sequence

Chromosome: 5; Position: 16908924 [Map]; Strand: w
- AT5G42280.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
  Distance: -917; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATACA 
TGTTTATTTC TATTTTAAAT AATATTTTAT TTATTATCAT TTGAAGACAA 
TTCACGATTA GCAATATCAT ATAAACATAT GTGCGTAACG GTAATAATAT 
ATACGTACAC GGTAGTAATG TGTACGTACA CGGTAGTAAT GTGTACNGTA 
CACNGGTAGT AATGTGTACG TACACGGTAG TAATGTGTAC NGTACACGGT 
AGTAATGTGT ACGTACACGG TAGTAATGTA TGTAGCAAAG GAAGGAATTT 
AAAAGCAGAG TGGAGATGGT AGGTTGAGAA GCTCTCCGGC GCCGGAGATA 
AGGTCGAAAA CCCGATACAA AGGCTCCAAC GTGACCACTA TCAATCCGAT 
AGTCCACCAC AGCTGACTGT TCGTCAAACG GACTCAAGAT CAAGAAGTTA 
GTTTTGAAGA CTTAAAGCAA GACGAGGTCT CGGTTTTTGT GAAACATTTT 
AACATAATAG CAAGCGTTGA GCTCGGCTCA ATTTATAAGT GTGACTGCGA 
GCGTTGAGCT CGGATTAACT GCAAGAATTA CTTTTATCTT TTGAATGTAN 
CTCGATACTA NGTGAACTAA NNTANCNNNN NGGGNCGNNN ANNNNNCNNN 
NNCC

AT5G09700.1

Model type: Protein coding
Short Description: Glycosyl hydrolase family protein
Computational Description: Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: beta-xylosidase 3 (TAIR:AT5G09730.1).
Link: InterPro Scan - TAIR

AT5G09710.1

Model type: Protein coding
Short Description: Magnesium transporter CorA-like family protein
Computational Description: Magnesium transporter CorA-like family protein; BEST Arabidopsis thaliana protein match is: magnesium transporter 7 (TAIR:AT5G09690.2); Has 549 Blast hits to 537 proteins in 115 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 123; Plants - 353; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G42280.1

Model type: Protein coding
Short Description: Cysteine/Histidine-rich C1 domain family protein
Computational Description: Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT1G55390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR