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Mutant Lines
11-1835-1

11-1835-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 1349483 [Map]; Strand: w
- AT1G04800.1 - [+] show detail - glycine-rich protein
  Distance: -197; Region: promoter
- AT1G04810.1 - [+] show detail - 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
  Distance: -697; Region: promoter

GATATAATTG CTGTTGAGTA AAAACAGTTA AAGATGTTTC ACCGGTCACT 
GGACAAGTTT TATGTTTCAT TGTCTGCCCA ACTGCCATAT TGATCTCATC 
CAACACAAAG AGAAAAATAT GATGCAAATA TAGTTGAAAA ATTGAAGAAC 
ATATGACACC AATTATTATA TACAGTTCCT TGAATTATAT TAATCATACA 
TTCATATCAA TTATATTAAA ATTTAATTTG AAGGTTGTCC AGGTTTCAGA 
GGGCAATAAC TAAAAATGAA AATGTTTCTG CATGTCTATT CATAATTTCA 
TATTAAGTGA AAACTCGTAT GGTCTAAGAG AAAATATTTA CTAGAAAATA 
ATTCTGACTT GATAAAAGAT GTAGTCGCTT TATGGGTTGG AGGACAGGCC 
ATGTCAATCT ATGGAATATT GAACTATCTA TATAAACCCT AAAATGTGAT 
TTCATTTATT TGTGAGCTTT AGCTTTTTAG GTGTCATCAA TCAATGATGT 
AAACTAGAAA CTCATATGCT ATACTTCCAA ACAAACCAAT AAAGTTTTTA 
TTATGGGCCG CTAGATTGGT CCATTAACAC TATAAGATAT ATAGTCTGGC 
CCATCATTAA ACCCAATTTT GTATTCCGAC TTTATGATTT TGTTTGGATC

3 prime edge [+] show sequence

Chromosome: 1; Position: 1349364 [Map]; Strand: w
- AT1G04800.1 - [+] show detail - glycine-rich protein
  Distance: -78; Region: promoter
- AT1G04810.1 - [+] show detail - 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
  Distance: -816; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGTCCA TGCACATTGA CGAAAAGTGC 
TTATGCTATC ACGATCTCTC TCTAAGTCTA TATATATACT GCTCATGCAA 
GAAGCAATTT CGTATCAAAA CATCCTCTTC CAATAGCTTC TAATATTTTA 
ACTACAAACA TTTTAAGTTT CCACTAACAA TGGGTCTAAT CGCCGGTAAA 
GTGTGTGTGT TTGTTTTGGT GTTTGCTTTG GTCACAGATT TTACTATGGG 
AGAAGCAGAG TTTGGTGATG AGAAGCCCTT GTTTCCTCAC CCTCACCCTC 
ATCCTCTCCT CCACAAGAAG GGCTTTAAAA AAGAATT

AT1G04800.1

Model type: Protein coding
Short Description: glycine-rich protein
Computational Description: glycine-rich protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; Has 109132 Blast hits to 26905 proteins in 1855 species: Archae - 173; Bacteria - 37969; Metazoa - 32319; Fungi - 6881; Plants - 10265; Viruses - 1569; Other Eukaryotes - 19956 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G04810.1

Model type: Protein coding
Short Description: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
Computational Description: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit; FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015), Armadillo-type fold (InterPro:IPR016024), 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (InterPro:IPR016642); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (TAIR:AT2G32730.1); Has 1171 Blast hits to 1071 proteins in 297 species: Archae - 14; Bacteria - 33; Metazoa - 390; Fungi - 382; Plants - 143; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink).
Link: InterPro Scan - TAIR