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Mutant Lines
11-1855-1

11-1855-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 1337733 [Map]; Strand: c
- AT1G04770.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: exon1 (CDS)

TCCGTGAGGC AACTTATGGA CAACGTTGTA CGCCGCCGCC GACGAGTCTT 
GTCTCTCACC TCCTCTTCTC TGAATCATCA TCATCATCGC AAACTTCGTG 
TCTCTGTTTC TAAATGAAGA AACCTTCTTT ATCTCTCCTA AATCCGGTAA 
CACCTTCCTT TCTCTCTCTA GGGGTGTGTG AAGAAAGATA TAATTATATT 
GTGGAAGAAG AAGAAGGAAC CTAGACAGAT TCTCGTCTTG GTTCATTATC 
GTCAACTGGA TCTAAAATAC CGCGGGCTGG TCGTTTTTCT AACCTATAAA 
ATAGTGCCAC GTACCCTATC CGTCCCCATT ATTCTCACAC GACTCCGACT 
TGGCCAGTTT TTTTTGTTTT TTTTTCAAAT CTAGTCCGTA GTTGTTATTT 
GTCCTCATAA ATAACGCCCA TCCTTAACTA TATTCTGCTG AATGTAGTTA 
ATAACCATAT TGTTTTGTAA AAAAAAAAAA AAANATNTTT CNCCCATTGT 
TTCTAAAAAG GGGTTATTCT AANGATTGGN CGGTAATTCA AAANGTNTAT 
AAAAAATNGT CCGANGATTT TTTCCAAATN AAAGTCTGAT TTTATTTTTT 
NGACTAGNAA AANCTATTAT GCTTTTATTA TTTCTCTAAC ATTTNCCCTT 
ATNTNAAATC TTATGCNATT NAATTTTTTT NANTTTNAAA ATTTTTTGGG 
CCCTTNAAAA AAATCAACNG CNTTTGTNAC ANCCTANAAN NAATTCNT

5 prime edge [+] show sequence

Chromosome: 1; Position: 1337617 [Map]; Strand: c
- AT1G04770.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: intron1 (CDS)

CTCACGGAGA CAGTCCTTAT GTCCGAGCGA AGCATGTTCA GGTAAATTTA 
ATATACATAT GTGTGACTTT ATCAAAAGGA ATCGAGTTTA TATTGATTTT 
TACTGAGATT TTGGATTTGA TGTTTGGTTC AGTTGGTGGA GAAAGATGCA 
GAAGCAGCGA TAGAGTTGTT TTGGATAGCG ATTAAAGCGA GAGATAGAGT 
TGATAGTGCT CTTAAAGACA TGGCCTTGTT AATGAAACAA CAGAACAGAG 
CTGAAGAAGC CATTGACGCT ATTCAATCCT TTAGAGATC

AT1G04770.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G48850.1); Has 226 Blast hits to 224 proteins in 29 species: Archae - 0; Bacteria - 22; Metazoa - 1; Fungi - 0; Plants - 173; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link: InterPro Scan - TAIR