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11-1858-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18023264 [Map]; Strand: c
      • AT4G38545.2 - [+] show detail - other RNA
        Distance: 0; Region: exon4 (NonCoding)
      • AT4G38545.1 - [+] show detail - other RNA
        Distance: 0; Region: exon4 (NonCoding)
      • AT4G38540.1 - [+] show detail - FAD/NAD(P)-binding oxidoreductase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1858-1 - 5-prime edge 
    CCTGTGACAC ACACCACTTT AGTTAACTTA CTCTGCTTTA TAACAACTCA 
    AAAGGCACGC CACACACACC TGTGTAGTCC AACAGCGGTG GAAAGGCCGG 
    AGATACCGGC GCCAACGATG ATGATATCNT GGGCCTGCCT TCTTCTTCCA 
    TGGTGCGTTG ATGATCTTAG AAAGAAAGCT CTGNTTTTCT TGCTCTCTTG 
    TATTTATTTT TAACTTTCAA GTAAACAAAA AGAAATGTGG TTGAAGTTGG 
    CAAGTCAAAC AAGGCACCCC GTTCTAGGCA GGCGGCTACA GTCATCAAAT 
    ATCGAATCTT TAATAGTATN TATATGTTGT CACACTTTAT CCCGTTCTNG 
    CTAGGGCGCA TATAATTGTN CATTATNAAT TTATAAACNG TGCCAGCAGA 
    GATACNCNCC TGTGNGGCTT ATTTCNGGAA AGANNACNAG ATTCNACTNN 
    AAANGNNTGA NNGAGGANNA NCAGGCTCGG NGCCGTNGAN CANNCNTGCC 
    CNGANGNGNA AANANTTCNA NNNCGTNCNN NGNTNCTANT GNAAANCAGN 
    NAGCTNNNCA NGNANGNNAN GAGATNNGTN NGTGGNGNTA NANAGANNNT 
    NGNTNCCNAA CCACNNAANN GNGNTNNNNA TTTNGGNGTN NCNATAGTGA 
    GCTNANNNGT CAACGGNTGG NNTNNATCNG GAANNNTNGN CGNNGNNANN 
    NATNGGATNN NATAAAGTNA ANATNTAAN

AT4G38540.1

Model type
Protein coding
Short Description
FAD/NAD(P)-binding oxidoreductase family protein
Computational Description
FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT5G05320.1); Has 5392 Blast hits to 5382 proteins in 1070 species: Archae - 48; Bacteria - 3093; Metazoa - 5; Fungi - 1172; Plants - 539; Viruses - 0; Other Eukaryotes - 535 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G38545.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT4G38530 and AT4G38540
Link
InterPro Scan - TAIR

AT4G38545.2

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT4G38530 and AT4G38540
Link
InterPro Scan - TAIR