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11-1885-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1425425 [Map]; Strand: c
      • AT1G05000.1 - [+] show detail - Phosphotyrosine protein phosphatases superfamily protein
        Distance: -168; Region: promoter
      • AT1G05000.2 - [+] show detail - Phosphotyrosine protein phosphatases superfamily protein
        Distance: -176; Region: promoter
    Flanking Genome Sequence: 11-1885-1 - 5-prime edge 
    CCAGCAAGGA CTCCTTTTTT ATTTTTATTT TTTGTCAATA GCTGTTTATT 
    TGTTTATTTT TAAAGAATTT GTGACATTTA TCTTAAAAGC T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1425541 [Map]; Strand: c
      • AT1G05000.1 - [+] show detail - Phosphotyrosine protein phosphatases superfamily protein
        Distance: -52; Region: promoter
      • AT1G05000.2 - [+] show detail - Phosphotyrosine protein phosphatases superfamily protein
        Distance: -60; Region: promoter
    Flanking Genome Sequence: 11-1885-1 - 3-prime edge 
    GTTGCTGGGT CCATCTTCTT TGCGTTCTTT TTCGTCTGTT GAATTTTGAA 
    CAGAGTCACA AGTCTCTCTC CATATAAACC TCCCCAAGGT CGACGCTACG 
    TAACGACCAT CTCCATTACT CGACTCTCCT CACCTAAAGA TTCAACCTTT 
    TCTCTGTTTC CCAATTCAGA GATGAAGCT

AT1G05000.1

Model type
Protein coding
Short Description
Phosphotyrosine protein phosphatases superfamily protein
Computational Description
Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro:IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT2G32960.1); Has 669 Blast hits to 655 proteins in 149 species: Archae - 0; Bacteria - 50; Metazoa - 4; Fungi - 355; Plants - 145; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05000.2

Model type
Protein coding
Short Description
Phosphotyrosine protein phosphatases superfamily protein
Computational Description
Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro:IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT2G32960.1); Has 580 Blast hits to 572 proteins in 119 species: Archae - 0; Bacteria - 14; Metazoa - 1; Fungi - 314; Plants - 145; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink).
Link
InterPro Scan - TAIR