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11-1889-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26686351 [Map]; Strand: c
      • AT5G66817.1 - [+] show detail - pre-tRNA
        Distance: -3573; Region: intergenic
      • AT5G66820.1 - [+] show detail - unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Arch...
        Distance: -2705; Region: intergenic
    Flanking Genome Sequence: 11-1889-1 - 5-prime edge
    NTNAAGCCAC CGGCCCNNTC GTGTACCNTN CNAGTACTGN TNTNGATNAG 
    ACTTTCGATG GGTCCTAAAN TGCCTTGCCT ATGCCGGTAT GANNCCATGG
    CTCACAAGTN TGGCAATAAT AAGAAGAGAT ATGCAGAAAT TGAAGATCAG
    AGCTTTTGCC ATTGATGATG ATTGAGTTTT TGTTAGTCAA AAATGTCAAG
    AATCAAGTCA AAAATAATAG TAAGAAGTCT CTCTCTGTTT CTTAAAGTTT
    TCTTGGGGTT TAAGATAGAG AAATGTAAGT GTCTTTAAGC TTGTATAAGA
    ATCTTCAAAT AGTAGTCAAC AGATGCTATG TGAAGAGTCT TGAATCTTAA
    AAGGTTTAAG GAATCTTGGG TTTGAGGGTG ACTATATATA GGCACCCAAG
    TGACATGGGA ACCCTAGTTA GGCTTATGGG TTTATCACAT CTTTAAAATT
    ATNTTCCTCN TTCCAGAATT TTTTAAAACT AAAGTATAGT GTCCAATTGA
    AAACTAATAT AGCAATTAAT NTNCTAATGA TATATGGTTG TTGTGAATGG
    GAAAGCTTCT CAGATGAGCT AAAAGGTTCA CAGNCTNCAC TTCACATTTG
    CNCCTAGNNG NCTATATNCC CTTAGTTTNC TTACCAGTTA CCCNTTATTA
    TATATACNTA TAAGCACCCC TTAGAGGAAG TACAANGAGT NATNAAACAA
    NANANAANAA AAAA
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26686419 [Map]; Strand: c
      • AT5G66817.1 - [+] show detail - pre-tRNA
        Distance: -3641; Region: intergenic
      • AT5G66820.1 - [+] show detail - unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Arch...
        Distance: -2637; Region: intergenic
    Flanking Genome Sequence: 11-1889-1 - 3-prime edge
    GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCGC 
    TTGAGAACCG GTGGTGGCTC TGTGAAGACT GACATTAGCA AAGAAGAACA
    TGGCGTTGAT GAGTTCCGGC CAACAACTCC GGGAAACAGC CCCGGCATTG
    GCCATTGATC CATTAGAACC TAAATAATTA CAATATTTAC AAACTTGTGC
    ATAGTGTACC AAGCTTAATG TGTTTGTCTT TCTGATATTC TCTTCTCTTT
    TCGTTTCATT TTTTTTTTTT TTANNAANNT TGGGNAAANG GGTTTNNNTT
    TTNGAAAAAC NAANAAANTT TTTTTTNNNA CCNCCCCNCN NGGGNAANNN
    NNNTTTTAAA NNNGGNNNGC NANNNNAAAA AGNNTTTTCN GGNANGGGAN
    TTCCNTTTAC CCCAANNNCA AAAAAAAANN TNGCNAAAAA ANCCNANNTT
    TTNNTNAANA NCCCATTTTT NNGGGGNNCC CCCNTNNNNT NAAAAAANTT
    TTTTGGGGNN AAATTTTTTN AANNNGGGGN GNGGNAAAAA ANNNACCCGG
    GGCCGNAANC NNCCGNNGCN CCTTTAAA

AT5G66817.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Gly (anticodon: GCC)
Link
InterPro Scan - TAIR

AT5G66820.1

Model type
Protein coding
Computational Description
unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR