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11-1932-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 5700719 [Map]; Strand: w
      • AT2G13680.1 - [+] show detail - callose synthase 5
        Distance: 0; Region: intron24 (CDS)
    Flanking Genome Sequence: 11-1932-1 - 5-prime edge 
    GGAGAGACAG GNNACAACNN ATGNATTATA CTACNTNNCN CNNTGANTAC 
    CTTATNNGGC GNGCCNTAAA ACCATGCCCN NNNNTGNAGG GAAATNGNGC 
    NGTAGATTGT TCCTTATACT TTCAGACCCT AGTTTGAAAC TAATTCAGTG 
    GCCACCATTT TTGCTTGCAA GCAAGGTTGG TGGTCTCCCT TTGTCATCAA 
    AAATACCGTT TTCTTCTTAT TGCTAAACTT CTCATCTTGG TACAGATACC 
    GATAGCATTG GATATGGCAG CTCAGTTTCG AACAAGAGAT TCTGACCTCT 
    GGAAGCGCAT ATGCGCAGAC GAATATATGA AATGTGCTGT CATTGAATGC 
    TACGAATCTT TCAAACATGT CTTGCACACC TTGGTAATTG GGGAGAATGA 
    GAAAAGGTAT TTCCTCATTC ATCAGAAAAG TTCTTGATTA TGATTTATGA 
    AGCACTTTAT AAATCATTAA AAATCTATAA GGAAACCAGC ACTCCAACTT 
    TTCTCTTCTG TTGAAGCTAC TGGCTGTCTT ATTAGTTTTG ATAATAGATG 
    TTCTCTACCA TGTCTNTACT TGATTTTCTG ACGTATTGGA GTAACATTTT 
    CCTCCTAAGG NGGCATTTAT AAGTGCGTNA ACATTCCTNT GNTTTNGATA 
    ATAAAATAGN NTTCTNAACC TTTNACATAT ATATGTGCTC CAACNTGCAT 
    TTCANCCCTT ATTGGT

AT2G13680.1

Model type
Protein coding
Short Description
callose synthase 5
Curator Summary
Responsible for the synthesis of callose deposited at the primary cell wall of meiocytes, tetrads and microspores. Required for exine formation during microgametogenesis and for pollen viability. Highest expression in meiocytes, tetrads, microspores and mature pollen.
Computational Description
callose synthase 5 (CALS5); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 6 processes; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 12 (TAIR:AT5G13000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR