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11-1936-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30131734 [Map]; Strand: w
      • AT1G80090.1 - [+] show detail - Cystathionine beta-synthase (CBS) family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 11-1936-1 - 3-prime edge 
    ANGCCTTGCA NCCNNCCGTN NTGGNCCACT ACGCNANNCT CTGTGTACAN 
    GNTNNGTGGT GACCATATGG ATCACCNTGG GCCAANGGTG ATNTCACNGT 
    GACACGTCAC AGAGCNTCCN TCCCTGGNGT NGAGGTAACN NNCGGNAGAA 
    CAAGAGAGAT CTTGGGATTT TCTCGACGAA CTCTAGTGCA TTTAGCGGCN 
    ACCACGAACG CAATGTGNCT AAATGACATC CCTTCAGATC NCTAGCCGAG 
    AATGTTCCCA CCNCTNTCCG NATTTTCNCN NTGNNCCNGN NNNCNCATCC 
    ATNNATCNNC ATTTNANCAN NCGCNNANNC TGGNGNNNTG CGTNGTGTNN 
    NNCGNAGNAC ANNNATCCCA CNNCTCACCT CTTNTNNCTN NCCCACTNNN 
    NNCNCANNNG ATGCNTNTCT NGNANNACAA TNCANNANCG CNNCCANNCT 
    NANCCCNTNC NTNTNTTTTA NNNTTCCCAT ATNNNNCNAG TNCGNCGCNN 
    NTTCNNNCGC NTNNTNCTNG CACNNGTCGT TTTTANCCCC NTGCNNGNTC 
    NNTNGNNANA GAANNTGNNG TNNCNNTANN GANCCNNTTN TCNNNGANNC 
    NCGTNNGCGG TTGGCANNGN TNTCTTNCGA NTNTTNNTAN CANCNNTNNA 
    NGCNGACGNC NNNCCGCTCA NGNTAGTCCA TNAATATANA NCGTNTNNNC 
    NTNCAGTNNN TNTTCATATT NNTNTCTNAT NTTTNGCANA NACNATANAN 
    ACAAACNNCN ACNNNNNCGT TGATANTTAT NNNTTANNAA ATNCNTNCAA 
    CNTNANGANN GAACGTCTAG ANGACAACGA NNANTAAGN

AT1G80090.1

Model type
Protein coding
Short Description
Cystathionine beta-synthase (CBS) family protein
Computational Description
Cystathionine beta-synthase (CBS) family protein; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) protein (TAIR:AT1G15330.1); Has 517 Blast hits to 517 proteins in 144 species: Archae - 0; Bacteria - 47; Metazoa - 83; Fungi - 146; Plants - 195; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
Link
InterPro Scan - TAIR