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11-1942-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
gynoecium (PO:0009062)
  • abnormal (PATO:0000460)
    (Flowers::carpel)
stamen (PO:0009029)
  • abnormal (PATO:0000460)
    (Flowers::stamen)

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3612922 [Map]; Strand: w
      • AT5G11320.1 - [+] show detail - Flavin-binding monooxygenase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT5G11320.2 - [+] show detail - Flavin-binding monooxygenase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1942-1 - 3-prime edge 
    GGTGTATACA CATCCACGTG GCTGGTGGTT GCCACAGGGG AAAACGCTGA 
    ACCGGTGTTT CCGAACATAC CCGGTTTAAA GAAGTTTACT GGACCGGTTG 
    TTCACACCAG TGCGTACAAG TCCGGTTCGG CATTCGCAAA CCGGAAGGTT 
    TTGGTGGTTG GTTGTGGAAA TTCCGGTATG GAGGTCAGCT TGGATCTTTG 
    TAGATACAAT GCTCTGCCTC ATATGGTCGT TAGAAACTCT GTAAGTAAAA 
    TATTAATCAT GCTCATTATT AAACTCTATA AGCT

AT5G11320.1

Model type
Protein coding
Short Description
Flavin-binding monooxygenase family protein
Curator Summary
Belongs to the YUC gene family. Encodes a predicted flavin monooxygenase YUC4 involved in auxin biosynthesis and plant development.
Computational Description
YUCCA4 (YUC4); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT4G32540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G11320.2

Model type
Protein coding
Short Description
Flavin-binding monooxygenase family protein
Curator Summary
Belongs to the YUC gene family. Encodes a predicted flavin monooxygenase YUC4 involved in auxin biosynthesis and plant development.
Computational Description
YUCCA4 (YUC4); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT4G32540.1); Has 12265 Blast hits to 12250 proteins in 1811 species: Archae - 85; Bacteria - 7080; Metazoa - 781; Fungi - 1596; Plants - 658; Viruses - 0; Other Eukaryotes - 2065 (source: NCBI BLink).
Link
InterPro Scan - TAIR