1. Home
  2. Mutant Lines
  3. 11-1968-1

11-1968-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17948374 [Map]; Strand: c
      • AT4G38310.1 - [+] show detail - Galactosyl transferase GMA12/MNN10 family protein
        Distance: -108; Region: promoter
      • AT4G38320.1 - [+] show detail - heptahelical protein 5
        Distance: -318; Region: promoter
    Flanking Genome Sequence: 11-1968-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATACNA GACGNNAANG CTCNGGCAAN AANGATAACA 
    CCATCTGATN AACNANCNGC GGNTCTAGTC TTTGACCCAG CCGTGTGNTC 
    CCATCNGAGA TGANGTCCAT GTCGACTGAC GAATCTACAA TGCNGCCGAT 
    TANAGATGAT GAGAAATTTC AGTAAAACTC TGAGAACAGT TGGGTGATGA 
    AGTAAAAATG TGAGTCAACT AAATGTATGG TAAGATAAAG GGATTATTAT 
    AATTCTGACA CAGATTTAAC ATAGTTTTTA GTTTTTCTCC TAATATAAAA 
    TTGATATTAC TATCGAAACA TTTATGGCAA GTGTTAAGAC TTTGAACTTT 
    GAAGTCAGGT TATTAATGCA CACGATTTAT GTATAGAATA TAATCGTTTG 
    AGAATTTCCA CTAATTAAAG TTCTCTCTAA CTAATTATTT CCATATAAAT 
    CTGAGCCATA ATGCTCAAAA ATATTAAAAG GATAAATATC ATTTACATAT 
    ATTTTTTTTA CAATTTATTT GAATTTTTTT TCCTTCTAAA AGCT

AT4G38310.1

Model type
Protein coding
Short Description
Galactosyl transferase GMA12/MNN10 family protein
Computational Description
Galactosyl transferase GMA12/MNN10 family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: Galactosyl transferase GMA12/MNN10 family protein (TAIR:AT4G37690.1); Has 254 Blast hits to 254 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 254; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G38320.1

Model type
Protein coding
Short Description
heptahelical protein 5
Curator Summary
heptahelical transmembrane protein HHP5
Computational Description
heptahelical protein 5 (HHP5); FUNCTIONS IN: receptor activity; INVOLVED IN: response to hormone stimulus, response to sucrose stimulus; LOCATED IN: integral to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: heptahelical protein 4 (TAIR:AT4G37680.2); Has 2557 Blast hits to 2136 proteins in 523 species: Archae - 0; Bacteria - 635; Metazoa - 1083; Fungi - 463; Plants - 198; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink).
Link
InterPro Scan - TAIR