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11-1988-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16554615 [Map]; Strand: w
      • AT4G34680.2 - [+] show detail - GATA transcription factor 3
        Distance: 0; Region: exon2 (3UTR)
      • AT4G34680.1 - [+] show detail - GATA transcription factor 3
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 11-1988-1 - 3-prime edge 
    GTTAAATTAC AACACTACAG ATAATGTTAC AAAAAGTAGG TTTTACCTAA 
    GTCTTATCTA CCACTTGCTG CCAAATTTGA CTGGGTCTGA TTTAGTACTA 
    GCTTCACCTG TTTCTTCACC CAACTCTTTA CTCTTTCTTA ATTCCAGAAC 
    CTTCCTATGA AGATTTGAGT GAATCTCATT CGAGAACGTC GGACTATCCG 
    CCGGTCTGTA TTCCGGGCAG AGCCTACCAG ACTTAAACCG GACTCCACAT 
    GCATTACATA AGGTTTTTGG ACCGACCGGA CCGGTTCTCC ACTGTGGTGT 
    GTTGTTTGTG CCACAATGGC TGCATCTTCG TTGAAACACA AGGACAGTTT 
    CTTGTTTCTT CTTCCTCAAC TGCTCTGTTG CTGCATGTTG ATGATTGGTT 
    GAAACGAGTG GCCAAACACG ACTACCGGTT AAACTGTTCC GAGACCGTTT 
    GGTTCTTGGT TTAACCGGAA TT

AT4G34680.1

Model type
Protein coding
Short Description
GATA transcription factor 3
Curator Summary
Encodes a member of the GATA factor family of zinc finger transcription factors.
Computational Description
GATA transcription factor 3 (GATA3); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 7 (TAIR:AT4G36240.1); Has 1460 Blast hits to 1422 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 551; Plants - 835; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G34680.2

Model type
Protein coding
Short Description
GATA transcription factor 3
Curator Summary
Encodes a member of the GATA factor family of zinc finger transcription factors.
Computational Description
GATA transcription factor 3 (GATA3); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 7 (TAIR:AT4G36240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR