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11-1998-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 865895 [Map]; Strand: c
      • AT1G03457.2 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
        Distance: -1820; Region: intergenic
      • AT1G03470.1 - [+] show detail - Kinase interacting (KIP1-like) family protein
        Distance: 20; Region: intergenic
    Flanking Genome Sequence: 11-1998-1 - 3-prime edge 
    TGATCATATA AAAGAATATC ATTCGACAAA ACCACAATCA TATAGAAGAA 
    CATTATGAAA ATCTAAAATA ATGGTCAAAC CTTTTAAACA ACAACTTCTT 
    ATCACCATTT ATTACACACA TAAAGTAAAA GAAAACAAAC TTACAGATAT 
    TAAAGAACAA AACAATTGAT TTCAAAAGAA AGACAATTAT ATTTAAACAA 
    GAAACGAACA ATAGAAAATG TAACAAACAT CCATGGACTT AGGTATAACT 
    ACAATCCTAT GATATACCTT ACGCTAACTA GTTGAGAGTA TACCCTACCT 
    ATCACAGAGT ACAAAGATAT TTAGAGAAAG TTCCTCAGTT TCTGTTCTTG 
    ATCACTCGGA CCTCTCTGTC TCCTCTAAAG AGTCATGAGC TCTTTGGAAG 
    TAGAATCTGT GTTTGGGAGA GCCCAATTGC CAAAGCCTTT TCCCCATAAC 
    CCTTCAAGCT

AT1G03457.2

Model type
Protein coding
Short Description
RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description
RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Ribonucleoprotein, BRUNO-like (InterPro:IPR015903), Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein-defense related 1 (TAIR:AT4G03110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G03470.1

Model type
Protein coding
Short Description
Kinase interacting (KIP1-like) family protein
Computational Description
Kinase interacting (KIP1-like) family protein; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT2G47920.1); Has 687 Blast hits to 664 proteins in 124 species: Archae - 6; Bacteria - 10; Metazoa - 109; Fungi - 52; Plants - 347; Viruses - 3; Other Eukaryotes - 160 (source: NCBI BLink).
Link
InterPro Scan - TAIR