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11-2006-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1244623 [Map]; Strand: w
      • AT1G04560.1 - [+] show detail - AWPM-19-like family protein
        Distance: -324; Region: promoter
    Flanking Genome Sequence: 11-2006-1 - 3-prime edge 
    GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTT 
    AAATATNAAA TATTAGCTTA AAGTTNTCAT AATTNTGCCA NGTTTCTTTT 
    CGTTNGTTAA AATGTTATCT GAGGAAGGTT GGGGATAATG AAAGAGGACA 
    AGNGATTAAT CACCGAGTAT CTAGAACTTC TTTTTTTCTC TTTTATCTTA 
    ATAACAGAAG GCGTTGNTAA TATCCGGAAT TGTTTGTAAC GAAATTTAGT 
    TGTATGAAAA AACGAAAAAA AAAAACAGTN GCATNCTNTT GCTNCATGGN 
    CCTNTNTTGG GTNGGCCCCA AAANGGAANC CCGCNTNTCA CAAACTTGTC 
    GGNCNNANCC CCATGGGNGN TTTNANATTN GTTTNTAAAA ANTAAAANCA 
    ANCCGATAAT TNACATGTTT TTTTTTTTTT NCCAAAANNN AAANAAANTT 
    TTTTNAAAAA AAAAANNNNN TCCGNCCCNN NGGGGGGNNA NCCNNAANNT 
    NGNNCNCCCN NGNCCCCCAA NCTTTTTNNN ANGGGTNTTT TNGNNNATTN 
    CCCCNAAACC NAGGGGGGGN TNAAAANNNN NNNGGNGAAN CACNNANTCC 
    CCTTTTTTTT TTTTTCCCNG GGTNNAACNG GGGNCCANAN CAATCCNNGG 
    CNACNNGGGT NTTTNACACC AAAANNANNN ANATTTTTTC NTNNANNNNC 
    TNNNNAGNNT CAAANNTCTC TATGNGTTTT ACAAAAANTT NCCCCCTTTT 
    TTATANANTT NTTNGNNGGG AAANAAAAAA NNCCNCNGNT TTTTTCAAAA 
    NCCCTTGT

AT1G04560.1

Model type
Protein coding
Short Description
AWPM-19-like family protein
Computational Description
AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR