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11-2015-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 299245 [Map]; Strand: c
      • AT4G00720.1 - [+] show detail - shaggy-like protein kinase 32
        Distance: -1931; Region: intergenic
      • AT4G00730.1 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
        Distance: 114; Region: intergenic
    Flanking Genome Sequence: 11-2015-1 - 3-prime edge
    TTCATCGCAC CAGTCTGTCA AGGGAATGAC GTGGCGCAAC GAAAATGGCG 
    GAATACGTAA GCCCCATATC ATGCAAAGGA NNGAGACAAG GTATAGCATT
    AAATGAATGA ATATGCCTGC AAAATACATT TAATGCTCCA CGAGAGACAG
    CTTTTTTTTT TTTTTNANNT NNAAANAAAN CAAANCCCNN CCAANNNAAN
    NTTTTTTTTT NNNAGTNGGG NTTTTTNANC CNNAANNCCC CCCCCCNGNG
    GGGNTNACCC CCCCCCNNNA ANAANANTCC NCAAAAAANC NNCCCCNNCC
    AAAAANNNNA ANGGGGGGGT TNCNNCCCCC ANTAANNCCC CAANCCNCNA
    ATTNNNCCCC NGGNNTGGGC CCCAACCCNT TTNNCNTGGG GGCCCCNNCN
    NGGGNANAAN GGNNNGGGNT NNCCCCCCCN CCCCNGGNTT TTTTTTNNNT
    NANCCCCCCC NCCNNCCNTT TTTNNAAANC CAAAAAANNA NGTTTTTNAA
    AANTNCNNAT TTNTTTAAAA AAAAAAACCC CCCCCCCCCC CCCCNNTTNA
    AAAAAAANNC NTNCCCNTTT NAAAAGGGGC NCAAANTTTT TTAAAGGGGG
    NANAANTTNN GGNNNNGNAA AGTTNCCCCC CCTTNANCCG GNNTTTTNGC
    CNNNGGAAAA TTTTTTNAAA AGGATTAAAC CCCCCTTGTT AAAAGGGAAA
    CNNNCNGGGG CGNGAAAAAC NGTNGNNCTN NATAANNTN

AT4G00720.1

Model type
Protein coding
Short Description
shaggy-like protein kinase 32
Curator Summary
Encodes ASKtheta, a group III Arabidopsis GSK3/shaggy-like kinase. Functions in the brassinosteroid signalling pathway.
Computational Description
shaggy-like protein kinase 32 (SK32); FUNCTIONS IN: kinase activity; INVOLVED IN: response to brassinosteroid stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 13 (TAIR:AT5G14640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00730.1

Model type
Protein coding
Short Description
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curator Summary
Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development
Computational Description
ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 12660 Blast hits to 12608 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9962; Fungi - 223; Plants - 2228; Viruses - 1; Other Eukaryotes - 246 (source: NCBI BLink).
Link
InterPro Scan - TAIR