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11-2065-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
whole plant flowering stage (PO:0007016)
  • premature (PATO:0000694)
    (Flowering & Growth::early flowering)
stem (PO:0009047)
  • decreased thickness (PATO:0000592)
    (Stems::thin)

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1061934 [Map]; Strand: c
      • AT2G03500.1 - [+] show detail - Homeodomain-like superfamily protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 11-2065-1 - 3-prime edge 
    GTCCTAGGTG GCATATGGGT TCCACCGGAG TACACCTCCG CACATGGTGG 
    CACTCCGACT CTCTACCACC ACCAAGTCCA CCATCACCAT ACCAACACGG 
    CAGGGCCAGC CTCCACCACA CTTTTGCTCC TCTCAAGAAT T

AT2G03500.1

Model type
Protein coding
Short Description
Homeodomain-like superfamily protein
Computational Description
Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G68670.1); Has 20396 Blast hits to 7290 proteins in 193 species: Archae - 14; Bacteria - 20; Metazoa - 401; Fungi - 967; Plants - 1637; Viruses - 8; Other Eukaryotes - 17349 (source: NCBI BLink).
Link
InterPro Scan - TAIR