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11-2086-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21226729 [Map]; Strand: w
      • AT3G57360.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 37; Region: intergenic
      • AT3G57370.1 - [+] show detail - Cyclin family protein
        Distance: 110; Region: intergenic
    Flanking Genome Sequence: 11-2086-1 - 5-prime edge 
    NCTCTAANTG CNNTNGTTAT ACATATTATT ATTTTTCGAT NTCNGTTATT 
    ACTGCAAAAA AAGAGAATTA TTATCTACAT ATGGATTAGT GCCCCAAACA 
    ATTTTTTTCT TTANATCCGC CACTTGCAGT AACACNGAGC NTTCTTTGAG 
    TGAGATTGTT TGTATCCTCG CACATAAAGA TCTAAGGAGC TCCAAGGTTT 
    TTCAGGTCAT TTGCATTGGC AAACCACGTG GGTACTATTG TTGGCAGATT 
    TGGATACAAG TCCCCGTATG TTCCTTTTAT CGTGTTTTCT GCAACTCCAG 
    TGGCTTCTAT TAGACCTGCA ACTCATTATG TGTCAATATG TNAGAGAAAG 
    AGAAGAGCTG ATCAGACTTT GCTTTAAGGG CTGCTATATA GATTGAGATT 
    TAAANGTGAC CTTTGANCAG ATGCTTCTCA TAAAAAAGTN GAGCAATGAC 
    ATATACNAAT TCCTGCTGNA ACTGATACAG GAGCCCTACG GCTGCAACTG 
    NANTAAGTAN AAATATATTG GGNTGTAAAG ANTGCNTNCA TNANANATNT 
    GCTTAAAGCT TACTCANCCA CNNATTTNCA NGGAACTGCT CAGAAAAGGT 
    AAANTTACCC CANTGANNCC GTGTAAAAGN AANTGTGTCC GCANCNTTGT 
    AATANCAATT CATNTGGTNC NCTTATTANA ATCTAAAATT ANGAGAAAAN 
    TGNGCCTNCT GCAGANGAAA AG

AT3G57360.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02370.2); Has 122 Blast hits to 122 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 74; Fungi - 4; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G57370.1

Model type
Protein coding
Short Description
Cyclin family protein
Computational Description
Cyclin family protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin-like family protein (TAIR:AT3G10330.1); Has 1320 Blast hits to 1319 proteins in 324 species: Archae - 441; Bacteria - 0; Metazoa - 207; Fungi - 261; Plants - 140; Viruses - 3; Other Eukaryotes - 268 (source: NCBI BLink).
Link
InterPro Scan - TAIR