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11-2090-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15560513 [Map]; Strand: w
      • AT2G37040.1 - [+] show detail - PHE ammonia lyase 1
        Distance: -150; Region: promoter
    Flanking Genome Sequence: 11-2090-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCGT 
    GTTCTCAACC AACTCCTTCT TTCTCACTAA TTTTCATTTT TTCTATAATC 
    TTTATATGGA AGAAAAAAAG AAACTAGCTA TCTCTATACG CTTACCTACC 
    AACAAACACT ACCACCTTAT TTAAACCACC CTTCATTCAT CTAATTTTCC 
    TCAGGAACAA ATACAATTCC TTAACCAACA ATATTACAAA TAAGCTCCTA 
    TCTTCTTTCT TTCTTTTAGA GATCTTGTAA TCTCCTCTTA GTTAATCTTC 
    TATTGTAAAA CTAAGATCAA AAGTCTAAAT GGAGATTAAC GGGGCACACA 
    AGAGCAACGG AGGAGGAGTG GACGCTATGT TATGCGGCGG AGACATCAAG 
    ACAAAGAACA TGGTGATCAA CGCGGAGGAT C

AT2G37040.1

Model type
Protein coding
Short Description
PHE ammonia lyase 1
Curator Summary
Encodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).
Computational Description
PHE ammonia lyase 1 (PAL1); FUNCTIONS IN: phenylalanine ammonia-lyase activity; INVOLVED IN: in 10 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: phenylalanine ammonia-lyase 2 (TAIR:AT3G53260.1); Has 4888 Blast hits to 4867 proteins in 1414 species: Archae - 40; Bacteria - 2973; Metazoa - 79; Fungi - 127; Plants - 1176; Viruses - 0; Other Eukaryotes - 493 (source: NCBI BLink).
Link
InterPro Scan - TAIR