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Mutant Lines
11-2153-1

11-2153-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 81280 [Map]; Strand: c
- AT4G00190.1 - [+] show detail - pectin methylesterase 38
  Distance: 0; Region: exon2 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTCA 
TGATGTTATT AGACTTGATT CCTACATTGA CATATTCCTC GTAAACGCCT 
TGCTTGACAT GTATGACATA CCTTGGGCTT CCTTTGGGCC TCTCTCCAGC 
ACCATTCACG GCCTCTTGGA TAGTTTTGTA GTCCCCGGAA CCATCTTGAG 
CCACCACTAC ATCCACTTTT TCACCTATAG ATAGTGTTTT CATTGTTATT 
TTCGATATCC CAAACTCCTT ACCGTTTTGT TCCATCCTCT AAAAAATACA 
AAAAAAATCA ATTAACAACG AGTGAATTAT TCAAAACTTG CTTGATATTT 
AAGATGGTTT TGAGAATTTT GCTTGGTTAG TAATAATTAT AGAGCTACCT 
TGTTGATGGC CAAGGTGTTA ATGACATCAA TGGTAATGCT CTCCAAGGAA 
TGAGACGAGA CACCGAGTTC TGACATCTCT TCCTGACATG TGTCTAGGTT 
GGTGAGTGCG GTGCTGAGCC ATGCTTGCAC GTCTGACCTA GAGCAAACGT 
TCTTGGGACA CAACACGCTC TCGTTGAGCC TGTGAATAGT CTGCTCGTAC 
AGATCCATAC ATTCCTCCCA AGCT

AT4G00190.1

Model type: Protein coding
Short Description: pectin methylesterase 38
Computational Description: pectin methylesterase 38 (PME38); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower, synergid; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT2G45220.1); Has 2963 Blast hits to 2921 proteins in 467 species: Archae - 10; Bacteria - 871; Metazoa - 1; Fungi - 198; Plants - 1837; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
Link: InterPro Scan - TAIR