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11-2169-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1220783 [Map]; Strand: c
      • AT1G04490.2 - [+] show detail - Protein of unknown function (DUF3527)
        Distance: -646; Region: promoter
      • AT1G04490.1 - [+] show detail - Protein of unknown function (DUF3527)
        Distance: -869; Region: promoter
    Flanking Genome Sequence: 11-2169-1 - 5-prime edge 
    TAGTTGACCA TGACCCATCC CTAAAGGTAC GCCATATTAG ATGTTCCAAT 
    TTTTCTGTTT TATTATTATT TATGTCTAAC AGCAAAAAAG TATTGACAAT 
    AAACTCGTAA CAGAAAAATG ATGTTGATGA TAATAATTAA ACAACATATC 
    AATTTATTAC TAGTTCACAA ACAGAAAATG TATGCATACC ATAAATATGA 
    GTACATGCAA ACAATTTAGA TGATGTATAA ACGAGTAGCC CTTTAGTTTC 
    TACGTTACAG TCTAAGTTTT GTTTTTCTTT GAGAATTTAA TATTGCGTCG 
    ATTAATACTC GGTACCTACT TGTTAGTTTT ATACGACTAG TACTTGCGAG 
    TTAAAAAAAC ATACATATTA ACAAAGGTTA CCGCCGATTG GAAATAAACA 
    TGCATATTAA AACCCACAAG ATTCACAATC ATCCATTCAA CTGATCTTTC 
    ACATTTCCAG TATAANAAAA CACTATGAGG ATNGTAACAT CATAGTTATT 
    ACGATATAAA TATTGAGTGA CGAATTAGAA TGATAATTAA ATTNTTTGNT 
    TTAATTNAAG NGGTAAAGAT GTTTAACANG ATATTNCNTT NTNTNCNCCN 
    GNCNNGNANA AAACNNGGGA TTGNNGGGAA AAGANANNCG CNGTTTTTNA 
    AGNAGGNAAA NNGCGGGNNN ANNNNTANAA ANGNNNNNNN CNNNNNNTNN 
    NNNNCNGNNG ANGGNNTGNT NNANNCCCCC CN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1220875 [Map]; Strand: c
      • AT1G04490.2 - [+] show detail - Protein of unknown function (DUF3527)
        Distance: -738; Region: promoter
      • AT1G04490.1 - [+] show detail - Protein of unknown function (DUF3527)
        Distance: -961; Region: promoter
    Flanking Genome Sequence: 11-2169-1 - 3-prime edge 
    GTCAACTACN TACACTCTTT TATAAAACCT CTNGAAACTA TAAATTACAC 
    CCTTCAATTT ATAATTCGTT TCTAAATAAT CACAATTATG TAANATGTGT 
    GTNATTTCAA CTATATTCCT ATAATATATA TACAAGTGCT CAATCCAGAT 
    ATAAAAGNGT GAAACGTAAT TAATTTTTTT TTATAAAGAT TTTCAAAGAA 
    AATCCGAAAG AAGAACCANA AACAACTTAT NATNNGNCAC AAAAATCCAA 
    TANNANTNCT AATAATATNA AATTCTAAAA CGTCTGACGA CGAGGAATCN 
    ATAAACCAAC CAACATAAAA TGACAAAAGT ATGANNGTCC TTGGACCTTN 
    GGCGTGAGAT TGGATCGAGA CACTATTGCT TGCCTTTTTT TGGTTGCTTC 
    TNGCNAAGTA TTNTCTATGC AATNAAAAAT NTGAAANGCC AAGCNCGCTG 
    GAAATAAACA TTNNGTANAT AATATNCAAT TNTTTCACTA ACCTTCNAAT 
    CAATATCTAN GNAGGNGTAT TNGTAANNGN AAANAANACA CTATTATTAN 
    TNTCAAATTT TGGAACCNCG TATACTAAAA ATTNGGGACA AACTTGGACC 
    ACANCTGNTT NTTTANTAAG GGTCAAAATG AGTNTTTATT TATTCAACAC 
    CCTNGAATTA CATTAANNGA CTTNATCCTT NANNANNCCC NCTNNTGTCN 
    CTTCNCCAAA ATTTNNGNAA TGGNCTTTTG NAACANNAAC CAACCCCTTT 
    NACTTNCCTA CCANTTTNNT NNTNGATTAC CCGGC

AT1G04490.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3527)
Computational Description
Protein of unknown function (DUF3527); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3527 (InterPro:IPR021916); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3527) (TAIR:AT2G33360.2); Has 121 Blast hits to 119 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04490.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF3527)
Computational Description
Protein of unknown function (DUF3527); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3527 (InterPro:IPR021916); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3527) (TAIR:AT2G33360.2); Has 121 Blast hits to 119 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR