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11-2183-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 804125 [Map]; Strand: w
      • AT2G02810.1 - [+] show detail - UDP-galactose transporter 1
        Distance: 689; Region: intergenic
      • AT2G02820.2 - [+] show detail - myb domain protein 88
        Distance: 49; Region: intergenic
    Flanking Genome Sequence: 11-2183-1 - 5-prime edge 
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCGC TCTCTCTGAA GTTTCTCTCT TTCTTCTTTT 
    TCCTTTAGTT TACACTCTGA AACAAAAACT CTATTTTTTT TTTANGNAAA 
    AANATNGGNT CNGNNCAGAN AATCAANAAA NCANCAAATC ANNAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 804118 [Map]; Strand: w
      • AT2G02810.1 - [+] show detail - UDP-galactose transporter 1
        Distance: 682; Region: intergenic
      • AT2G02820.2 - [+] show detail - myb domain protein 88
        Distance: 56; Region: intergenic
    Flanking Genome Sequence: 11-2183-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ATGTCGCCTT TCTGTATACA GTAATGAAAT ACACAGAAGA AAAAAGATAA 
    ACAAAGCT

AT2G02810.1

Model type
Protein coding
Short Description
UDP-galactose transporter 1
Curator Summary
Encodes a multitransmembrane hydrophobic protein that functions as transporter of UDP-galactose and UDP-glucose into the Golgi. Localized in the ER. Involved in the unfolded protein response, a mechanism that controls proper protein folding in the ER.
Computational Description
UDP-galactose transporter 1 (UTR1); CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: UDP-galactose transporter 3 (TAIR:AT1G14360.1); Has 1052 Blast hits to 1046 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 503; Fungi - 150; Plants - 232; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02820.2

Model type
Protein coding
Short Description
myb domain protein 88
Curator Summary
Encodes a putative transcription factor (MYB88), involved in stomata development, double loss of MYB88 and FLP (MYB124) activity results in a failure of guard mother cells (GMCs) to adopt the guard cell fate, thus they continue to divide resulting in abnormal stomata consisting of clusters of numerous guard cell-like cells. This phenotype is enhanced in double mutants over the single mutant flp phenotype.
Computational Description
myb domain protein 88 (MYB88); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G14350.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR