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11-2307-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8770964 [Map]; Strand: w
      • AT1G24800.1 - [+] show detail - F-box family protein
        Distance: 0; Region: exon1 (CDS)
    2. Chromosome: 1; Position: 8785343 [Map]; Strand: w
      • AT1G24881.1 - [+] show detail - F-box family protein
        Distance: 0; Region: exon1 (CDS)
    3. Chromosome: 1; Position: 8807872 [Map]; Strand: w
      • AT1G25055.1 - [+] show detail - F-box family protein
        Distance: 0; Region: exon1 (CDS)
    4. Chromosome: 1; Position: 8822250 [Map]; Strand: w
      • AT1G25150.1 - [+] show detail - F-box family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-2307-1 - 5-prime edge
    CTAGGAGTAG CTCCCAATGT CGGGGAACCT TGTCCCAGAA CCGGGCATAT 
    TCCGACTACA TATCGTCCCC CGCTTGTCTG CTCGTCTACT TACCTTCCGA
    GTTTAGTGCA AGTCAACCAA CAGCGCAAAA GGAAAGAAAG ACATGTTTAG
    TTTTCTGTTC CTTGCAGTTC TCAAGACTGC TAGTCAATTC TCAGTTACAT
    TTCCATGTTA TCTTTCTCCT CTTTTAGTTT CTCTTCTCAA ACTTACTCTT
    GTCATGGTTT AAGTTTCTTA CTTTTCGTCA GTGAGATGGT TAGGTACCTT
    ATTTGTTTCT TGCATTGTCG TCTGCTAGTA AATTTATCAA AGCATTGTTC
    TAGTCACTTG TTCACTTGCA CCATCCTTAA GCAAAGCATG ACATGGTTTC
    ATGTACTGTT AGCCCAATTA TGGAGTACAT ATCTCATATA AGTTAGTCTG
    TTTCTGCGTT TACTTCTAAG TTAGTCCCAA TTATGGAGTA CATATCTCAT
    ACATATCTTA TATATACGAA AAGTGATATC TGATCTCATC TCATGTATGT
    TGTGTTTCTT ACACCATTAT GAATACTATC TGGCCTTTAC AGGTTCGTCC
    TGTAGTGAAA GAAGTACTAG ACACATTTTG GGGTAGGTGC TTANCTAGGA
    ACCAATTAAA ACTGAAAGAC CCTCGGCAAT TTTTTGTCGC TAGGCATGCT
    TAAATAACCA NAGCTTTT

AT1G24800.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G25150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G24881.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G25150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G25055.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G25150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G25150.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G25055.1).
Link
InterPro Scan - TAIR