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11-2441-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 54049 [Map]; Strand: w
      • AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
        Distance: -600; Region: promoter
    Flanking Genome Sequence: 11-2441-1 - 3-prime edge 
    AATGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    CTGGTAAACA CGGAAAATAT CACATATACG AATCCTTTTT CGGATGTGTT 
    TTCAATCCTT TGAATTAAAT ATGTCCACAC TCGATATGTA AAAACAACTT 
    GACCCATCAC AATTATGATC ATAAAATACC AACGTACNTG TTAGCCTAAT 
    GATAAATCTC CCAAGCAGAG GTGTTTAGAT CGAGTTATGT TGTAAGGGAT 
    TTTTTCTCCA AAGGAGATAA ATTTAATTTG ATGTGAATT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 54040 [Map]; Strand: w
      • AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
        Distance: -591; Region: promoter
    Flanking Genome Sequence: 11-2441-1 - 5-prime edge 
    GGGATAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC TAGTGTTTAC CGCATTATTT TTTTTATAGT 
    TTGCTTTGTT TCTTGTGGGA TATTTCATGT ATTTTGTTTG AAACAGATTA 
    GTTTTGTCCA ACCATATTGC GTATACGATC CATACAAAAT AAGAAAGTTT 
    CCACCTTTCG TTCTATATGA TCATATCAAG GAAGGAGAGA GCGCAATGCG 
    AATGGTGTGA AACGTGTTAT TGGTAAGATA ATGCATGGCC TACACCCACT 
    TTCTCTTTTT TTTTTNNTAA ATTAATTAAT TTGGCCNCCA GNNNAGTTGG 
    ATTTNTTTNT NTNTNNAAAA GNNCCCNTAA AAAAATTTNG GGGGGNNGNA 
    AANCCCGNNT NGTNAANAAC CNNNCTNGNC TNGNAAATAN ANAAGGGAAA 
    AAAANGGGCC NAANNAAAAA CCCCNAANNN NTAAGNNTNA AACCAAAAAA 
    ANCTTNTACC NGNTTTTNAN GGNNATNAAN NGGGCCTNNG TTTNNAAATC 
    CNNAAATNTN TAGNGNAATT NGGANCTAAA NAANAAAAGT NGGGAAGGGT 
    TTTTGNCCNG NTTTNCACNT TAACCAANNT AAAGGCNNCC CTAAAAANGG 
    AAANAAANNT GNGGNGAGTT NGGGANNNNC CNTTNNNAAG GGGTNCCCCN 
    GGTNCAAATT TNNNNNAACT NGNNAANAGN TNNTTTTTTG NAANAANNNN 
    CCNCCCCNNA AAAATAANTG NNNNCTTNTN AANGGANAGG GNGGGGNCNA 
    ATTTGGGGGN ANCCCCCCCC

AT4G00140.1

Model type
Protein coding
Short Description
Calcium-binding EF-hand family protein
Computational Description
embryo sac development arrest 34 (EDA34); INVOLVED IN: polar nucleus fusion; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: calmodulin-related (TAIR:AT1G73440.1); Has 80 Blast hits to 56 proteins in 14 species: Archae - 3; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR