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11-2443-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26328494 [Map]; Strand: w
      • AT5G65790.1 - [+] show detail - myb domain protein 68
        Distance: 3916; Region: intergenic
      • AT5G65800.1 - [+] show detail - ACC synthase 5
        Distance: 2252; Region: intergenic
    Flanking Genome Sequence: 11-2443-1 - 5-prime edge 
    NGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATATTG ATAAACTCCA TCGGCATTAA TAAATCGACT 
    TTATATTATA ATTGAAGACG GTGCATCTAA GCCAAAGAAA CAAATCTTTG 
    TGTGATTTGA TAATTGTCTC TTACGTAACA TATGTGCGAT GAATCTTCTT 
    AATCGTGCAC ATATTAAGTG GATGTATGTA CGAAGCACAT CATTAATTTA 
    AGTTCTATCG TTCTAATTAT AGTTATAAAG ATATATTCGT ATATATATAA 
    AAATAGCTAG TGACTTCTCG ATTCATAAGC TATGCATCAA GTACGAGAAA 
    AACTAACGTG ACCCACATGG TATATTAGAG AATACTATAA TATATGAAAA 
    AATTTAATTC TGAAAATTTC CCCATAATGT TATGTTATGT ATGGATCAAG 
    TATGTATGTG TAACGTAAGT AGCAATGCCA TGCGTAGATG ACCCCTCTTG 
    CATACATGAA GAACATCAAA GGGGTCCTGG CGTATAATTG ATGTAATTTG 
    AATT

AT5G65790.1

Model type
Protein coding
Short Description
myb domain protein 68
Curator Summary
Encodes a putative MYB transcription factor.
Computational Description
myb domain protein 68 (MYB68); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 84 (TAIR:AT3G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G65800.1

Model type
Protein coding
Short Description
ACC synthase 5
Curator Summary
1-aminocyclopropane-1-carboxylate synthase (ACS) is encoded by a multigene family consisting of at least five members whose expression is induced by hormones, developmental signals, and protein synthesis inhibition.
Computational Description
ACC synthase 5 (ACS5); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-aminocyclopropane-1-carboxylate synthase 9 (TAIR:AT3G49700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR