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11-2459-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 20162281 [Map]; Strand: c
      • AT5G49660.1 - [+] show detail - Leucine-rich repeat transmembrane protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-2459-1 - 3-prime edge 
    ACTCCAACCG CGATTTGATG ACGAGTACGC CACTCAAGAT GAACAAAGCC 
    TTTGTGAAGA GCGTCCCATA AGTTACCATT AGGCATGTAC TCATATACCA 
    AAAGACTACA ATCCAAACTT GAGAAATAGC TGAAGAGTTT CACAATGTTC 
    TTATGGCGAA TGCTCCCGAG GGTCTCAACT TCGGTTTTCA ACTCCTTGTT 
    CAAATGCATT TTGTCTTCAG AAGCTGAGTC TTTGTTGCTT TGGCTCCATA 
    GTTTCTTCAC CGCAACTACT TCACCGGATT TAAGCTCTAC TCTATAGACA 
    GTACCCGAAC CACCATGACC TACGATGTTC TTGTCCACAA GAGATTCAAG 
    AATCTCCCTT TGGTCGAAAC TTATGCGGTG GAAACTCTTG ACGTCGTAGG 
    AGAAGAAAGA AGACGCTAAG GTCTCGTCTT GCTCTATCAC TGCTCTGTTT 
    TTACTCATCC GTTGTCTCAA GTAAAACATG ATGACCCCTA GGACTAGGAT 
    GAAAACTGAA ACAAGTATTG CCCAGATGGA GCTCAACTTC TTCTTGCCGT 
    GAGGCTCTTG ACACATCGGA AACTTCAAAT CTGATGAACC AGCAGTTGGT 
    GGAATACAGA GATTAGGGTT ATCCGAAAAG CTTTCTACAA GACCTCCTCT 
    TATCAATGAG ACGGGGATAG GACCAGAGAG CCGGTTGCTG GAGAAATTAA 
    TCGAGGTTGG GAGCAACTCG

AT5G49660.1

Model type
Protein coding
Short Description
Leucine-rich repeat transmembrane protein kinase family protein
Computational Description
Leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT1G09970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR