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11-2462-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 64176 [Map]; Strand: w
      • AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-2462-1 - 3-prime edge
    CGTCCCGGTA TCAGCAGCAA CGAGCACCAA TTCACGCAGA TGTCTAGAAA 
    ACGCAATTCC AACCCAAAGT CCAATATCTA CAGGATCAAC TTTTTCTGAT
    TCAAACTCAA GACGAAAGCT CTCTAGAACC GGGGCTTTAT GTGAAAGGAA
    AGATTTGCAA ACTATCTCTG AAAATGTATA CTGTTCTTTG TCGTCGTAAT
    CCTCAGAATC GAACTCGAGA TTTGGCACCA ACTTCCAAAG AGGCCTCCAT
    TGTTTAGAAA AAACACTCGT GGCTACGACA ATCTTTGTTG GAAGAAAAGA
    CAGTATCTTT ATAAGCAAAG CATCAGGCAA CTCACTGATC CTGTCTTTAC
    CCATAACAAC TCTAATTCGC AAACTTTCAC TAGCAAAACC AAAAGAAGAC
    AAGAGTTAAA ATTAGGGTTT CGAGTTTTTT TTTGTTTTGC TTGTANAAAG
    AAGCTACAAA GTTTGTAATA CAACAGATTC ATCCTTGGCA AAAAAGATCA
    AAACAAGGAA GCTAAGANTC TACGAGAAGA AATATATGAG TAGAAAAGTT
    GTCTAGTCAT ACTTCAGCCA TAATCGCATG AGGGAATTGA AAACCTTTCG
    TTTCCTCTTT GCAAGAATGG AATCACGGAT CTGTCTATCA AGAGACTTGA
    AAGGAGACAA AGAACCCAAA CCCAAACGAA ACAGAGAATG CNCCGGAGTC
    CAGACCCATT AAACGGNGAC AAAAAACCCN ACCG

AT4G00160.1

Model type
Protein coding
Short Description
F-box/RNI-like/FBD-like domains-containing protein
Computational Description
F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 2232 Blast hits to 2187 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR