1. Home
  2. Mutant Lines
  3. 11-2492-1

11-2492-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13055900 [Map]; Strand: w
      • AT4G25570.1 - [+] show detail - Cytochrome b561/ferric reductase transmembrane protein family
        Distance: -277; Region: promoter
      • AT4G25580.1 - [+] show detail - CAP160 protein
        Distance: -284; Region: promoter
    Flanking Genome Sequence: 11-2492-1 - 5-prime edge 
    CTTCTACCAC CAACCAAACC ATTAAACCGC GATAGAGCAT ACTGGATCTT 
    TTTTAAGGCC CATTATGTAC ATTTCTGTTG GACCAACCCA TTGCGCAATG 
    GAAACTATTC ATATGATATC ATTTCTTGTC GTTTTCGGAT TTCAGTGACT 
    GTGTTATGCT GTTTTCCCAA TGATCGAAAC GGCATGTTGT TGGAATGGGC 
    TAGTGGGCTA ACTTGTGAAA GAAGGTAACA TCGACGGTTC TTCTCGGATA 
    AAGATTAGGC TGAGAGCGCC ACGCACACAA TCAAGAGCCT GATACGTGGC 
    ATGACACGTG GTATTTCGTA AGATAAAGTA CAGAGGACAC AGCCATCCAG 
    AGGTAGTTCG GCTATGCGTC TTCCTCCTCT TTCCCATACT CTCTGACTCT 
    GTATAAAACT TTGAAGAAGC TCCTCATATT TTCTCAGAAA CAATTTGGAT 
    GCATAGAAAG GAAAAGAACA AAATCAAATC TAGCAAATAA AATGGATTCA 
    CAAGCGCAGT TGCAACGTAC TCATGGTCAT CACCAAGCAC AGGAGCCAAT 
    AAGGATTCAC CATCCAGGGT ATTGCGAAAA CCAGATTCTA ATCTCAATGT 
    AAAGTTTTTG TTTCTATTGG ATATTTCTAA AATCNTGGAA GTGAGAGANC 
    CTAATGAATG GTTTTTACGG GGTNCCTNGG NTNTGAATGC NNGAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13055784 [Map]; Strand: w
      • AT4G25570.1 - [+] show detail - Cytochrome b561/ferric reductase transmembrane protein family
        Distance: -161; Region: promoter
      • AT4G25580.1 - [+] show detail - CAP160 protein
        Distance: -400; Region: promoter
    Flanking Genome Sequence: 11-2492-1 - 3-prime edge 
    GGTAGAAGAA ACAGACACGA AGCGCGGAAG CGGAACTAGT AGATGCAGCT 
    ACTACAATAT CCACGTGGCG AAACATTAGT CGTTTATCGA GAACTGCCCC 
    ACGAAATTAC ACGTCTGAAT AGATAAATCG AAAATGGATC GTGAGGCCCA 
    CNGTGTCTGC GAAGAAGGGC CCACAGTGGA TTATTGAAAA GAAGAAATGG 
    AAAATCTGAG GATTGATTCG TCTCAGAGGC CGAGGTTGAA GATTAATCGG 
    ACAAAGGAGA TTAGAAGAGT AGAAAAAACG ACAAGAAGAA AGAAACACAG 
    TTGCAGGAGA GAAAGAGATA TGGCTGTCCG GATAAACGCG ATGGCGGTGA 
    CGTTTGTGGC GCACGCGCTG GCGGTAATAG CGGCGATTAT GGTACTGGTT 
    TGGAGTATCA GTTACAGAGG TGGATTGGCC TGGGAAGCTA CTAACAAGAA 
    TCTCATCTTC AATGTATGTT TCTTTCTTTA ATCTCCTTTA AAGTTTTCTC 
    TTTTCTGTCT CTCGCATCTG CGTTGACTTT TTGTATGTCT TGNATCTGAC 
    TGGNAAGCTC CANNCNGGGN CGGNANCCNN GNGNCGT

AT4G25570.1

Model type
Protein coding
Short Description
Cytochrome b561/ferric reductase transmembrane protein family
Curator Summary
Encodes cytochrome b561.
Computational Description
ACYB-2; FUNCTIONS IN: carbon-monoxide oxygenase activity; LOCATED IN: integral to membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: cytochrome B561-1 (TAIR:AT5G38630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G25580.1

Model type
Protein coding
Short Description
CAP160 protein
Computational Description
CAP160 protein; CONTAINS InterPro DOMAIN/s: CAP160 (InterPro:IPR012418); BEST Arabidopsis thaliana protein match is: CAP160 protein (TAIR:AT5G52300.1); Has 292 Blast hits to 249 proteins in 85 species: Archae - 0; Bacteria - 26; Metazoa - 66; Fungi - 33; Plants - 116; Viruses - 9; Other Eukaryotes - 42 (source: NCBI BLink).
Link
InterPro Scan - TAIR