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11-2501-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 512485 [Map]; Strand: c
      • AT1G02470.1 - [+] show detail - Polyketide cyclase/dehydrase and lipid transport superfamily protein
        Distance: 0; Region: intron3 (CDS)
      • AT1G02470.2 - [+] show detail - Polyketide cyclase/dehydrase and lipid transport superfamily protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 11-2501-1 - 3-prime edge 
    GCTAGGAGGA TAAAAAGATT CATTGAAATG TTAAAAATCT CTAATCAAGA 
    AAGAAGAATC TGATTGGTTG ATTGATATAA TAAAAATTTT ACCTGTAAAT 
    TTTTTGCGAG AAAGTGATAT TCAATATTTT GTCCAAAAGA CTCGAGTTTT 
    ACCAAATAAC GCGATAGGTC TGGACTACCC TCCATTGCCT ACGAGGAAGC 
    AAATGATTTG TGAGCAACAA ACGACTCTGT TTTTTAGAGT TAAAGAACAA 
    AAAAAATACG GGAAAATGTT ATTTAATACC TGAACTTTCA AAAAATGGTC 
    AAATTAACCG TGAATT

AT1G02470.1

Model type
Protein coding
Short Description
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Computational Description
Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT1G02475.1); Has 391 Blast hits to 391 proteins in 131 species: Archae - 0; Bacteria - 247; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G02470.2

Model type
Protein coding
Short Description
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Computational Description
Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT1G02475.1); Has 390 Blast hits to 390 proteins in 132 species: Archae - 0; Bacteria - 247; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink).
Link
InterPro Scan - TAIR