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11-2518-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 694878 [Map]; Strand: w
      • AT5G02960.1 - [+] show detail - Ribosomal protein S12/S23 family protein
        Distance: -363; Region: promoter
      • AT5G02970.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: -91; Region: promoter
    Flanking Genome Sequence: 11-2518-1 - 5-prime edge
    GGTGACAGCA ANCGNGCCCC ACGTNCAGCC TACCANTTNG CCCGCGGTTC 
    NNCAACCGAN GCNACNTGNA CANANNATGA ACCGTTNACG TTNAAAAATG
    ACANCTTACT GATCCAGGCG GTCCATGTTT ATTAATGCGC CAGCCTAAAT
    CCGAAAGGAA GAGAGAGTCA AAGAAAAGCT CCAGAACCTC GTCAATGGCG
    GACTGCGATT TCTCACCTTA CTAGCCAGTC AAATCAAGGA GGCGATGGAG
    AATATTGAAA AAGACGAACA TGAGAAAAAA AGTTTAGCTG AAGAATAAAT
    TGAAGATTCG AATCAAACCA TTAGTCTTGT GTTGAAGCTG TTTCTACGTC
    ATTTGGTAAN ATAAACTTTT GTCTCCTTTC GCTTTCTTAA GGGAAAAAAA
    AAAAAANNAT TNGNTTTNNN AATTTTTGTT NCCAANATTT TAAAAAAAAA
    AATNGGGGGN TTNAATTTTN NCCCNTTTTN AAAAAGGGNG ANNTNNGNNC
    CNNAATNNNN NNNCNNGATN TNTTTTNTAA AAAAAAANAA CNNNGNTTTT
    NTTNAAAAAA AANAGNNNNN GGNTTT

AT5G02960.1

Model type
Protein coding
Short Description
Ribosomal protein S12/S23 family protein
Computational Description
Ribosomal protein S12/S23 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein S23, eukaryotic/archaeal (InterPro:IPR005680), Ribosomal protein S12/S23 (InterPro:IPR006032), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Ribosomal protein S12/S23 family protein (TAIR:AT3G09680.1); Has 9074 Blast hits to 9071 proteins in 3107 species: Archae - 259; Bacteria - 5125; Metazoa - 487; Fungi - 294; Plants - 977; Viruses - 0; Other Eukaryotes - 1932 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G02970.1

Model type
Protein coding
Short Description
alpha/beta-Hydrolases superfamily protein
Computational Description
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G09690.2); Has 911 Blast hits to 905 proteins in 207 species: Archae - 6; Bacteria - 480; Metazoa - 9; Fungi - 40; Plants - 329; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink).
Link
InterPro Scan - TAIR