1. Home
  2. Mutant Lines
  3. 11-2523-1

11-2523-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 126101 [Map]; Strand: w
      • AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: 0; Region: exon12 (CDS)
      • AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: 0; Region: exon12 (CDS)
    Flanking Genome Sequence: 11-2523-1 - 5-prime edge 
    GTTGCGTATA AATAAGGAGA GGTGGCTTTG GGGGAAAGAC ATGTTGAATC 
    AAGTGGAGGA TTAGTCGCTA TGAGACTATC GTATGGAGAG AATATATTCG 
    AAGAGATGCC GAGAATCTAG TCTCGTTCTT CATTTGTTTT GATTGTTCAT 
    TCCTTGTAAT TCCTAAACCT TGAGAGTCTT TATTAATCTA TGGAACTTTA 
    TGAAAGATAG GCTTTAATCC AGTATTTACA TTGAGATTCA TAATACTAAA 
    GTCTATCAGT ATTGTGTTGC ATTCTGTTCT TATTATGGAA TCCGGATCAA 
    TGGTATGAGC ATTTGCACAG ATGACATCGA AAGAGCATTG CAGAGTTGCC 
    TGGGAAGCGT TTAAAGAGTG CGAATATTTG TGAATTGTGA CAGAGAAGCC 
    TTGTTAGGTA TTTACGACTG TCATTATACT ATCCAGGATT CTACCTATAA 
    TTAGGGCTAT TGAAAATAAT GTAATAGTGC CAAATGATCA NATTGTGCTG 
    GTTATTTCAC AGGTCTCTGC NAATATAACA GTTTAAGCTA CCANCCCNGG 
    GCNGNGAACA NNCNTGCCCN NTTNTNGNGN NNNNTTNNNT NNNNCNCCCC 
    CNNCCC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 4889071 [Map]; Strand: w
      • AT2G12160.1 - [+] show detail - pseudogene, hypothetical protein
        Distance: -139; Region: promoter
    Flanking Genome Sequence: 11-2523-1 - 3-prime edge 
    ATTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    AATCCCAAAG CACAACCTTA ACCCTTCATA CGTGTGATCC ATGTCACCTC 
    ATCAACCTCC TTACTTGTCA TATCATCACA CGTGTGTGCT ACTTTGTCCT 
    TCTTTGTCCT GAAATACACC CTGTGTAACT TATCAATACC CCCGCCTTCG 
    AAATGCAGCT TGTCCTCAAG CGTAAATGCA GAACCTTGCT TCTCCATCTG 
    TGCCATGTAG AAAGGGATTT GGTCTGAAGG GCACACCAAG TAACTAAGTT 
    TTGAAGCCAC ATTATGTATC TAGTGACCAT GTTTCCTCCA AAGAACAATA 
    TAGAGTTGTT GTTGGTATTT GTAGTCTTCG TGATATACTT TTGAAAGAGA 
    CTGAACATTT CTAGGTTGGA GGCAAGAGTT GTCTTCTGCA AAGGGTGTTG 
    AACTTCTTTC AAGCGATGAT GAGCTTCGTT TGTTTGTAAT ACAACTCTGC 
    TATTCACTTC TGTCTTTGTT AAACACCTTC GACTAGGCAT TGTTGTTAGT 
    ACTGCCTGTC CTTCTGTTGA GATACTGTGA TCCAAAAATG CAGCCTGACC 
    TACAATAAAC TGATCGCCCA CACAAGCAAT CTCTCTAACT GCGTCAAGTT 
    CCTGAGAACC ATACTTAAGT GCAATAGGAG ATGGAACTGG TAGAACCACT 
    AACACAGTNG TATCATCTTC GNTGCATGNA TCTATGGCNT TAGTNCTTCT 
    TTGNGCCATA NATGGACTTN

AT2G01220.1

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.2); Has 432 Blast hits to 425 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 78; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01220.2

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G12160.1

Model type
Pseudogene
Computational Description
pseudogene, hypothetical protein
Link
InterPro Scan - TAIR