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11-2549-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28892075 [Map]; Strand: w
      • AT1G76920.1 - [+] show detail - F-box family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-2549-1 - 5-prime edge 
    CAAATNNTGA CCAAAGAGAA TATAAAATAG TCAATGTATG AAAATATTCA 
    AATGATAAGC AGACAAGTAG GTGACTCAGC GCATTAAGCA ACCCAAGGAC 
    AAAATGGGAA CTATATATTA TTTCCCTTTT CTTCACCACT CTCCTTCCGA 
    TACCCAAAAC CGGAACCAAT GACAACGCAT ACCAATGGCG CATTCTCATA 
    CTTTTCCGAT TTTACCCTTT AGTTTTCCCA CAATTCTCGA TTAGACCATT 
    TCTCTCCGCC GCCGAAACCT ACGGAGAAGG AAGAGAAAAA CCATGGAATC 
    GTCTCCGGTA AACTGTCTTC CACCTGATTC TCTCCACCAG ATCTTCTCAT 
    CTCTTCCTAT TCGTGATATC ATGATCTGCA GATCCGTCTG CAAGTTCTTC 
    AACCAGCTTT TGACCTCTCA GTGTTTCATA GAGATTATCT CAACTCGTCC 
    GCCGTTGAAT CTACTCGCTC TCCGACCTCC TCATCACCAC CACAGTCACC 
    GTCACAGCGG AAACGGACAC GCAACGAATA TCCGACCGTA CATCCATGTN 
    TATGATCCAG AGCAGAATCA ATGGTTCAGA TTCAATCTCG ATNTCCCTCC 
    CTTTNCGATC TCCTCAGCCT GTAGNCTTCT TCAAGCGGAT TGATCTATCT 
    TTGGGGAGAT TCGATTGATT TACCTGAATC TANCCAATCG CTCGTCGCTT 
    GGNAATCCGT AACTTCGNAG TTCAAG

AT1G76920.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Kelch repeat type 2 (InterPro:IPR011498); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G61590.2); Has 279 Blast hits to 279 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 279; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR