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11-2560-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
seed (PO:0009010)
  • abnormal (PATO:0000460)
    (Seed yield::seed shape)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13841779 [Map]; Strand: w
    Flanking Genome Sequence: 11-2560-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT GGCGCGTCAG CAACGCCGGA 
    GAATCCATCA GAATCGGAGA CCGGAGAAGA ATCAGACGCG GCGTCGATGG 
    TAGTCGAAGA GCTGGTGACT TCTCTCAATA CACAGAGACT TTACAGGGAG 
    CTGACACTAT CCCTCAGGAC CGGTTTACGC GATGCTTGCG CTGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13841682 [Map]; Strand: w
    Flanking Genome Sequence: 11-2560-1 - 3-prime edge 
    GCTCCATATC GGTCTCTTCA GATACATCTC TCTCGCTCCG TTTTCTCTCT 
    CCCTCTCCTC TGGTAATCAC ATTTATTGCG CCAAAACGAC AACCACTTAG 
    CTTTGGTAAA CATAAAGCAG CACGTAGTCT AAATTTTAAA CGGCAGACCT 
    TTCTTTTTCC CTAGTAAGTT ATCTTCCAAG CTACTCAAAG ACAAAGTATG 
    GAGATTCATA TTACACTTAC AAAGGAAGGT TCTGAGGCGA AACACAAGAG 
    AAGCTATTAA CATCTTTATT AACAGAGAAA CCTTGTTCGA ACAAATCCAT 
    AGTTTGAACA CAAGAGACGA CATAATTAAC ATACAGAGAG AGACAATGAA 
    GAACTGGAAA AATGGCTGAT GATGACTTGT GAAATCACAA AGCCAAATTT 
    TATCTATATA CATTTTTGAG CCAATCCAAT AATGAATT

AT4G27750.1

Model type
Protein coding
Short Description
binding
Curator Summary
A genetic locus involved in sugar sensing and coordinating carbohydrate synthesis and utilization by the whole plant. Lines carrying mutations in this gene shows restricted carbohydrate allocation to plant growth and seed set, elevated chlorophyll levels, and reduced sugar induction of starch biosynthesis.
Computational Description
IMPAIRED SUCROSE INDUCTION 1 (ISI1); FUNCTIONS IN: binding; INVOLVED IN: sucrose mediated signaling, regulation of carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cell division control 14, SIN component (InterPro:IPR012535), Armadillo-type fold (InterPro:IPR016024); Has 74 Blast hits to 74 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 31; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR