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Mutant Lines
11-2572-1

11-2572-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 1234344 [Map]; Strand: w
  - AT1G04530.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
    Distance: 0; Region: exon5 (3UTR)
Flanking Genome Sequence: 11-2572-1 - 5-prime edge
```
ATTATTATGC AAGAAACGTA AAAAACAAAA ACGAGATTCT GGCATTTCTG 
AATATACAAC ACATAACGGA CATGCATGAA GCT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 1234228 [Map]; Strand: w
- AT1G04530.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: exon5 (3UTR)

ATAATAATCC TTAATTTTCC AACTATGTAA TATAAATGCT TATTGATTCA 
CTCGGACCCA AGTTATCTCA CAGAGTTATA AGTATGAATT TGCACTTATA 
TGCTTAATGA TATAGACTAT ACTACTAACC AATTTCCTTC TTATTTATTG 
ACACTAGACA GTATATAATA TAAAGGATAA TAGTCCGATA TAGTCAGAGC 
ATTAGTAAAT TGGCAACATT TATATTAGTG GAAAATTACC TAAGGGTCAG 
TTGGAATAGT TAGTGTAATT GATTGAGAAA AACAAAATTC TTTTTTGTTC 
ACATTTTTTC ATCCACCACA AATTCCTACC TTCCAATAAT CTGAACTAAT 
ACAAAGAAGA TATAATATAA TAACAATTTT CATGAAATTT TAAAGTTTGG 
ACTTGGAAAT TAATAGCCTC AAAGAGAGAA AAATTAAACT TGTGCCTATC 
TCATGAGGGA TTGGACTCCT TTTGTTCTCT TCCTCTCCAT CTTTCAATAG 
TCTGCCAAAA AAAGATCCCA AAAAGATATC ATTGGTTATG ACAATTCCAA 
ATAATCTTCC CTTTAATATA TTCTACATCA CATGTGCATG TGTTTTGTAT 
AATCTATGCA TGTATTTACA TGTATGTAAT CAAATACTAN ATGCTTATGT 
ATGTAACTAT ATAGNGAAGA AAATGGTACC GTCATGTTTC TTCCTCATNA 
AGGTTTTGGG CAAAAAGCAG CCAATGACAA GAAGCCCACN CCNCT

AT1G04530.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G17940.1); Has 713 Blast hits to 362 proteins in 65 species: Archae - 10; Bacteria - 98; Metazoa - 37; Fungi - 8; Plants - 512; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Link: InterPro Scan - TAIR