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11-2600-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 19004133 [Map]; Strand: c
      • AT5G46830.1 - [+] show detail - NACL-inducible gene 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-2600-1 - 5-prime edge 
    TTCTNAACCC CATCTTCGGG TNNGCTTGTN GTATCATAAG ATCGNTCATC 
    ACAGAAATGC TCGCATGANT TCACCTTCTA ACTCCAAATC CATCAAAGCA 
    TTCATCAATC TCGCTCCTGG ATGATGATCC TTCCTTGATT CAACTCTAAC 
    CATTGCATCA TCACTTCCCA TAATCTTCAC TTCGATCTTC ATCATCTCTG 
    ATGCCTTTTC CTCGTATTTA CAAACGCTAG GAATTGCGTT TCGTTGTCCT 
    GCAATCTCCT TGAGTTCATT GAACTGAATC TCAATCGCAT GTTTCTCCAA 
    TTCAACGTTT TCAGCTTTTG ATTTCAGCTC GTTTATGTAA CAAACCGCGT 
    CTTCGAGCAA CGACGTTTTG TCCATTTTCG ATACGTTTGG TACAACCGCT 
    CGTAACGCGT AGAATCTGTG GTTTAGCTTC TCACGTCTCA TCCTCTCTGC 
    TTCCACGTGG TTCAACGGCT TGTCTCTACC ATGCGCCGGT TTTCTCCCGC 
    GCTTTTTTCC CTTCTTCTNN TCCAGCATCA CCGTCGCGTG AGGGACGACG 
    TTTTGAATCT GATCANAATA AGTATNAGGG TNCCGATTTT AAAACTCNGG 
    TTTAACATTC TGGCCAAAAC TNANTACATN GCCGNATGGG AGCTCTCGCA 
    ATGTGGNAAN AAGACNNCNA NAAANTNCAA ATNANNCNGG TTTTNGANAN 
    AACCGGACNA GGAGNCGGGN

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 19004249 [Map]; Strand: c
      • AT5G46830.1 - [+] show detail - NACL-inducible gene 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-2600-1 - 3-prime edge 
    GTTGAGAATC TACAAGCAGG AAGAGCTTAG GGATTTGTTG ATGTCGAAAA 
    TTAGCTGAGA GTTTCTGCGG TGTGTTTTGA GAAAATTAAT CATGGGGTCA 
    AAGTGTAATT AAGTTTTGTT GATTTTCTCA TAAGTTAATG GCCGTTTTAT 
    TAGATTTTGG ATAATATACA GTTCTAATCT TGTGACCCAA AATTAGGGGG 
    ACTTATTGCA AATGGTCAAC CCTGGAATGA ACGAGATGAA CACAAACACA 
    AATGGTGCTT GAATCTTTTT TTTTTTNNTT CCCCTTNGTN NNCCACTCTN 
    NCACCCNNNA AAAAAAAAAN TTTCTNTTTT NGGNCCTTNG ANNCCCNNNN 
    GGNAAAANTT GGGNNGNGTT TTTTTTTTNA NAAAANCCCC AAAAAAATCT 
    TTNGGGNCNC TTTATTCCCC ACTNTNTTTN NGGTTNNTAN AAANTATNCN 
    NNTNNGTGTT NNTAANNNCT NNATNNNACT NNCNTCCNCN TGTNNCCCCN 
    NANTCTNTAN ANCNAANCNN ACANTNTAAG TNNNNNTCNN NNCCNNTCNA 
    NATGNNTNTN TNNNCNNGCA CNNNNTCNTA TTTNATNTTN NNNNTNNAAT 
    TATTNNCTNN CNNNCCGAGA NGCGNTTTCT TCTANAANAN ATNNTNNTTT 
    CCTNNGCTAC NNCAANANNN TAATNAANCN GAACGTCNGN NTNTNAAGNA 
    AAACGNTNNC TCTNNNNCTT NTNCTGAACC CCCACCCTCN TNNANTNTAN 
    ANACCNTNNG GANCNNNAGA NANCNTNNCN TTNCANTNAT

AT5G46830.1

Model type
Protein coding
Short Description
NACL-inducible gene 1
Curator Summary
Calcium-binding transcription factor involved in salt stress signaling.
Computational Description
NACL-inducible gene 1 (NIG1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: Basic helix-loop-helix (bHLH) DNA-binding family protein (TAIR:AT1G32640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR