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11-2607-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16207904 [Map]; Strand: w
      • AT2G38770.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon8 (CDS)
    Flanking Genome Sequence: 11-2607-1 - 5-prime edge 
    ATTCCCATGC AGAGTTTGTG AACCTACAAG AATATGCTTT CCAGATATAT 
    ACCTTTGAGC AGACAACATC CCTTAAATCT TCAAGAGAAA GCACAGACAA 
    TCTCCTCCGA AGATCAGAAC TCTTGTGAAT CGAACCAATG TTAGCCAAAG 
    ACAGATCTTG CAACTGAAGC AAACCAGATA AAAACAAATG TGAGAATCTA 
    GAGAAGCGTT TGCCAAAAAA TATTAGAAAA TAAGGAAGAG AGTAGATCAA 
    TGACTTCAAA ATCCAATAGT AACATAACAA AAATACCTAG TACACAAAAC 
    TACCTATCTA TTAATTAACC ATGATTACCA GGACAATACC TTAGGTATTT 
    TCTTAAAGGC AAGTAGCTGA AACGCCATAA AACGATCGTA ATGAAATTGA 
    AGTGCTTCAT CATCAGTTAA TTGTGTTCCA TCATGATCCT TTATCTCAAA 
    CTTTTCGTAG AACTGTAACA AGTCAACTAG TTGGGCGAAA AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16207807 [Map]; Strand: w
      • AT2G38770.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: intron8 (CDS)
    Flanking Genome Sequence: 11-2607-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATATT 
    GCTGAGGCAA TTCTATGATG ATCATATCTT TTCTGCCAGT TTCATTATGC 
    TAAGGCTCTT ATAGTTGTGA GCTTTCAGTG AATATTATTG GCAAAATGCT 
    TAGCAAAATC AGAATACAAA GTCTAAGTTG ACATGCTAAA AGATCTATGG 
    GTTGACACAA ATGTAGACGT TATGTATCTA CTTGTTTGAA TT

AT2G38770.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
EMBRYO DEFECTIVE 2765 (EMB2765); LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RNA helicase, putative (TAIR:AT5G47010.1); Has 4121 Blast hits to 3614 proteins in 689 species: Archae - 125; Bacteria - 655; Metazoa - 959; Fungi - 1056; Plants - 630; Viruses - 0; Other Eukaryotes - 696 (source: NCBI BLink).
Link
InterPro Scan - TAIR