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11-2618-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18006767 [Map]; Strand: c
      • AT4G38490.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 0; Region: exon3 (CDS)
      • AT4G38500.1 - [+] show detail - Protein of unknown function (DUF616)
        Distance: -989; Region: promoter
    Flanking Genome Sequence: 11-2618-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTCA TAAGTTATGA GAGCTCCAAC TTTCACGAGC 
    GGAACCTACA GATCCCACCG TGCCACTTCC ACGCACATGT TTATGACTGA 
    CTCTCCCATT GATACTCTAC ACACTCAAAC AGAGCTTAAG TGAAAAGCT

AT4G38490.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G38500.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF616)
Computational Description
Protein of unknown function (DUF616); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF616 (InterPro:IPR006852); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF616) (TAIR:AT1G28240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR