1. Home
  2. Mutant Lines
  3. 11-2641-1

11-2641-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1238853 [Map]; Strand: w
      • AT1G04540.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-2641-1 - 3-prime edge 
    ATTACCTCCA TCTGTGTGAC GGCGGTTATG CTTTTTCGTC GTCGGAGTTT 
    TCCGTCTTGA ACTCATTCCT CCCCCGGCAG TTGCAGCTGG AACGCTCGCG 
    CCATCGTAAT CAGTGCTACT TATATGGCTT GATCCTATGT CGTACAACGG 
    TGGAAGCTCT GTTCGCCATC TCTCGAGTTT TGATCGCAAT CCTTCGATGC 
    TAGATTCATC GATGCTCCAT TCGCTGAGTA TTGAACTTTC CGTTTCGTGC 
    GATCTATCTT TCGCCAATTT GTCAGCCACT TCAGATGGCG ATGGTCCTAA 
    CTCCGATTCA GTTAAGATTC GTCTTCCAGC TAAATTCCTC ACTGGTGTAC 
    CAAAATCGTG ATGAGTTCTC ATCGGTGTAG CCATGTAGTT TGATCGGATC 
    GGGGTTGATC CGACGATGTT TGATCTCATT GGAGTCGAAC CAACCATGTT 
    AGACCGCATA GGAGTTCGCA TTGGAGTCGA TCCAACCATG TTGGGATGCA 
    TCGGTGACAT TGCGATGATG TTGGATCTCA TAGGAGTTGA TCCAACTCCG 
    TTAGATCTCA TCGGAGTAGA TGCGATGATG TTTGATCTCA ATGGTGTTCC 
    GTGCTTCGAT AAGTACGGGG AAGCTCGGCC ACGATCGTAA GCTNCCANCC 
    CGGGCCGNNN ACCACNCGGN CCC

AT1G04540.1

Model type
Protein coding
Short Description
Calcium-dependent lipid-binding (CaLB domain) family protein
Computational Description
Calcium-dependent lipid-binding (CaLB domain) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT2G33320.1); Has 556 Blast hits to 454 proteins in 75 species: Archae - 0; Bacteria - 32; Metazoa - 92; Fungi - 46; Plants - 336; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink).
Link
InterPro Scan - TAIR