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Mutant Lines
11-2678-1

11-2678-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 1240037 [Map]; Strand: c
- AT1G04550.1 - [+] show detail - AUX/IAA transcriptional regulator family protein
  Distance: -338; Region: promoter
- AT1G04550.2 - [+] show detail - AUX/IAA transcriptional regulator family protein
  Distance: -338; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TTTAGGCTAA AGCAATACAA TTTTTGGTTA AGAAAAGAAA AAAACCACAA 
GCGGAAAAGA AAACAAAAAA AAACTATATT ATGATGCAAC AGCAACACAA 
AGCAAAACCT TGCACACACA CATACAACTG TAAACAAGTT TCTTGGGACT 
CTCTATTTTC TCTTGCTGCT TGAACCAAAC ACAACAACGA TNTCCCAACG 
AGAGCACAAC AGGTTTGATT ATGTCGGAAG ACAAGTTTTG AGAGAAAACA 
AACAATATTT TATAACAAAG GANAANACTT TTGGTTAGGA AAAATTGGTA 
TGGCCATTAC AAGACATATG GGTCCCAATT CTCATCACTC TNTCCACCAC 
CAAAATCCTC CTCTCTCTCT CTCTCTCTCT CTCTTTTTNA CTGTGTTTAN 
ATNATCTNTT TCTCTCGTCT CTCTNAAACC NTAAANACAC TNTTTTTNTT 
NTNGGNGTCN NCATTCTCTG TGTGNNATAA AGCTACCANC NNGGGCCGTA 
AACCACGCGT GNCCNTTATA

AT1G04550.1

Model type: Protein coding
Short Description: AUX/IAA transcriptional regulator family protein
Curator Summary: IAA12/BDL plays a role in auxin-mediated processes of apical-basal patterning in the embryo. bdl mutants lack a primary root meristem
Computational Description: indole-3-acetic acid inducible 12 (IAA12); FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, embryonic pattern specification, root development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: auxin-induced protein 13 (TAIR:AT2G33310.3); Has 1087 Blast hits to 1087 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1087; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G04550.2

Model type: Protein coding
Short Description: AUX/IAA transcriptional regulator family protein
Curator Summary: IAA12/BDL plays a role in auxin-mediated processes of apical-basal patterning in the embryo. bdl mutants lack a primary root meristem
Computational Description: indole-3-acetic acid inducible 12 (IAA12); FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, embryonic pattern specification, root development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: auxin-induced protein 13 (TAIR:AT2G33310.3); Has 2001 Blast hits to 2000 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2000; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR