Home
Mutant Lines
11-2711-1

11-2711-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 85695 [Map]; Strand: w
- AT4G00210.1 - [+] show detail - LOB domain-containing protein 31
  Distance: 0; Region: exon2 (CDS)

TAAGTTACAG GGCAATCCAG TTAGTACAAA ATAAAGAGTT CCTAATAAAT 
GTCGCAAAGG TTAACATGGT TATATTAAAG AAGATGGTCG GTATTTGCCT 
CCGGTCAAAT ACTTAGTGAA GAACTCACGG GCAAGAGCNG TTAAGATCAC 
CGTCCTCATC CACTGGATTT TCCAGGCCAA AGAATGTGCT AAGATCCACT 
GACTCTGTTG GGACCTCAAT AGCTTCTTTT GGCTGTTCTT GTTCTTGTTG 
TTGTGACATA CAAGGAATGT GTGACGACGA GGAAGACATA TTGTCTTTGC 
TATCGACAGA AGAAATGAGT GGCACATTAG ATGAAGAGGC TGCTTCTGTC 
CGTGAATTGT TTTGAGAATT AN

3 prime edge [+] show sequence

Chromosome: 4; Position: 85579 [Map]; Strand: w
- AT4G00200.1 - [+] show detail - AT hook motif DNA-binding family protein
  Distance: -885; Region: promoter

GTAACTTAAA AGGGGCGTTA ATAGATTCTA TTGGATTTGC AGTGCAAACT 
CACATCTCAC ATCTCACGCT TGACGTCGAC ATGACACCCA TGTCCCTCTA 
TTTTATTATA AGGCTTTGCT CCATTTTGTT GGGTTCCAAT AATCAAAATG 
TTAAATGTGT AATTCATAAG TAATACAGGC CCAAAAGGTT AAGGCCCAAA 
AGCCTCAAAT GGGCTTATGT TAAAATCTTG CCTTTTGCAT CCAAACCCAC 
TTGCCTTTTC TTCAAGTGTG ACTAAAAACA TTATGTAATA AAGCTAACGT 
TAATCACTTG TCTTGGAAAT ATACAGGGGT GATTAATATA TAATAGTGGT 
GAAGGTGGTC TCGAGGCCTC GAAATTTTAA TTTGAACTCA AGGAAAGATG 
TGTTGACACG TAATGAATGA TCCAAAAGCT

AT4G00200.1

Model type: Protein coding
Short Description: AT hook motif DNA-binding family protein
Computational Description: AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 772 Blast hits to 768 proteins in 34 species: Archae - 0; Bacteria - 6; Metazoa - 13; Fungi - 0; Plants - 749; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00210.1

Model type: Protein coding
Short Description: LOB domain-containing protein 31
Computational Description: LOB domain-containing protein 31 (LBD31); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 19 (TAIR:AT2G45410.1); Has 416 Blast hits to 414 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 416; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR