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11-2713-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1281179 [Map]; Strand: w
    Flanking Genome Sequence: 11-2713-1 - 5-prime edge 
    GGANANAGGG AGATNACTAN GATATGCCNC AAATANNNGG NCCGGGNCGT 
    NAANNACNNN TGCCCNACAN GGNNGCCGAA CAACCCNNGN CAAAANGATT 
    GTTTGGTGCG TCGCTTGATG CTATGAGTGT GGCTCATGAT ATTGCTAATA 
    GGTGGAAAGA AGAGTCTAAG CAACAGAAGA AAACTGCTGC TGCTCGTCAT 
    CGTCGTTGTA TTTCACATTT CTAATCATCA TTATCAAATT TAGGGAAAAA 
    AATATTCAAA AAAAGAAGAA GATAATTAAG CCCTCTCCTC GGAAGAAAAT 
    ACCCCCAAAA AAAAGAGAAT TGTGAAAAGA AAAAAATAAT AGGGGGATTT 
    TTCTTTGTTT TTTTAGGAAG ATGGGGCTTT TTTATGTATT TTTATTTTAA 
    NAGNGCTTAA TTTNGNGGTN GNNTTTTTTT NAAATCTTCA TTTTAGATTT 
    NGAACTCTGG TAAGANGTTT NGCTTAATCT AATNNGACAA ATNTTTTTTA 
    CGGTTTTGAA TTTTTTTCTN ANCGATGCAT GTGGGGTNAT CTCTATGAAG 
    ATGTNGGNGA TCNGGAAAAA AAACANCNAA TTNANTGCNG TTNNTTTNTN 
    GGAAANAAAC NTNNNCANGN TNGNNGCTGT TNTTTNANTG GTTTAAGGAA 
    TTNTNACCAT TTTGGNANNN NTNANNTTTG GGANNNGGGT NGNTTNNNNN 
    GAAANTGNCT NGGGAAAAAA AAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1212891 [Map]; Strand: c
      • AT1G04470.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-2713-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TCTTCTTCTT CTCCTTCCTC TGTTTCTTCG ATTTCGGCCT TCATGTTTTC 
    TATTACCTTT GAGAAGGCGT TTTTAATAGA TGCTCTTATA TAGTAATCGA 
    CGCGATCCCC TGAAGAATCC ACCAATTTCA CATCACCTTT CTCTAGACCA 
    TTCATTTGAG AGATTGTCAC GTCCTCCCCC AAGATCTTAG AAGAAGACAA 
    CGCTAATGGC AGAAGATTCT CGATCAATCC CACGTTCCCT CGTTGAAAAT 
    AATCATGATA GCTCAACAAC CTATAATCAC ACATTCACAA TCAGATTCAG 
    TTTTGTGTGA TCAAGTCCAT TTACAAGGCA AAAAGAAATA CCTTTTTTCA 
    GTCCATCCTT GCATAGAGGC CAATGTCGAG GTCAAGAGCT TCACGTAAAG 
    AGCCTCGCGA TCAGACTTCT TGGCGTCATT GGCAACTTCA GCCAACATGG 
    CGTGAGAGGC ACCAAGCAAG TCTGGCTNCA TCTGTGATGT CACAATGTAC 
    TGATGAAACA GAACCCAAGT GAAACACANG TTATGTATAG CTCGTGTGAT 
    CCCCAACATT ATNCATGTCT TCTTCATCAG TTCTAAAAGC TCATCGATTT 
    CATCAAGAAA CCAAGGTCTC ATCACGTATT GTCAAANATT CGACTGCCAA 
    AAGCGNCCCC ATAGAGATGG ATGGCAAAGT GGGTNTCCAT CANCCCCATG 
    GGCCTTATAT CGGATGNTGG AAGTAACGGN TGNCCCATGG ACAANGGAGG 
    CG

AT1G04470.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF810)
Computational Description
CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT2G33420.1); Has 201 Blast hits to 187 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 4; Plants - 177; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04610.1

Model type
Protein coding
Short Description
YUCCA 3
Computational Description
YUCCA 3 (YUC3); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: YUCCA 7 (TAIR:AT2G33230.1); Has 9657 Blast hits to 9637 proteins in 1196 species: Archae - 33; Bacteria - 4899; Metazoa - 784; Fungi - 1494; Plants - 670; Viruses - 0; Other Eukaryotes - 1777 (source: NCBI BLink).
Link
InterPro Scan - TAIR