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Mutant Lines
11-2716-1

11-2716-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 297351 [Map]; Strand: w
- AT3G01830.2 - [+] show detail - Calcium-binding EF-hand family protein
  Distance: 0; Region: intron1 (CDS)
- AT3G01840.1 - [+] show detail - Protein kinase superfamily protein
  Distance: 0; Region: exon2 (CDS)

NNCACAGGGA CCCANTCCTT GCATACTCNA ANACCANATA NGAGNCTTGA 
TCGATTNNTC TAAAACATGT TCCAAGAACC CTAATCAGAT TGTGGTTATA 
GTAGTGTGAC TGATCATTGA GAAGCCCGAA ATCGAATCTT TTCATTTCAT 
CTGCATTGAC TTGCTTTATA GCCAAGTCTT TGCCTTTGAG CGAACCGAAA 
TAAACCGAAC CTTTGATGTG ATTGCTTGAA CTGAAATTCT CCGTGGCCTT 
CTCTAACTCT TCAAACGCGT AAATCTCCAG AACGGGTTTT CGGGGCGTTG 
TGGTGCCGAC GGTGTTGTGA GAATCCAAGA TGGAACCGTC CTGCGACCCT 
TCAAACGAGA TTTTCTTGTC ACTCGTGGTT CGGATGCTCA GACTCAGCTG 
CCGCGTCTCG GGGTCTTTGT TGCTAATCCA CTTTTGCGTT TGCGTTTGAA 
TCTGCGTCTC TTTCTTCCAG TGTAAGTAAC CAAACACCAT GAGAGTGACA 
AGACCGCAAA CTCCANCAAT CGCGCTGCTC ACAGCGATCA TGAGCTTNAT 
CTTTGACCGN TCTTCTTGGA TGGATTTNTT TTCCGGGATA NCANNNNGGG 
CCNNNNA

3 prime edge [+] show sequence

Chromosome: 3; Position: 297267 [Map]; Strand: w
- AT3G01830.2 - [+] show detail - Calcium-binding EF-hand family protein
  Distance: 0; Region: intron1 (CDS)
- AT3G01840.1 - [+] show detail - Protein kinase superfamily protein
  Distance: 0; Region: exon2 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAA 
GAACAAATTG GCCATCAAGA ATCAATTCAT CGAGTCTTGT TACTGTTTCT 
TGGCATGGAA ACAGAGGATC AAGATATGTC ACGATGTCGC CATCGCGTTA 
AAGTATATGC ATCGGATCAA CTACGTCCAC GGCAACATCA AGAGCAGAAA 
CATCTTCTTG AACGAAGATC TCAGAGGTAA AGTCGGAAAC TTTGGGATGT 
CAAAGTGCGT AACCAATGAA TTAGCCACAG AAGAGAACCT TATAGAGAGT 
TCACTGTCTC CAGCTTCTGA CATATTTGCT TACGGGATAA TCGTAATGGA 
GGTTTTGTCT GGACAAACCC CAGATATGTT GCTTGGATTG CAAGAAGTAG 
AGACAACATC CCTTGGGACA CAAGAAACTT TTGTTTCCGA ATGGAGTAGA 
TTAAGAAGGC TTCTCGGGGA CAAGGAAAAG CTGAGGGAAG TGATGGACAG 
CACATTGGGA GAGAGCTATT CGGTTGATTC TGCGTTTGAA ATCGCAAGTA 
TTGCAAGAGA TTGTACTGCA GAAGAAGCCG AGTCAAGGCC GAGCGCGGTT 
GAGATTGCAG AGAGGGTTTC AAGATTGGTG GATGACGATG AAGATGAAGA 
AGATGAGGCA GTAATAGATA GAGAGAGTAC CTTAATTTCA GAGAGTTCAT 
ACAAGCCTTT GGTAAAGAAG AGTAGTATAA TAGATTAAAA ATGATATTTG 
TACCTATGAA TATGTTATTG CATCATGGCC CTAAACTCAT CA

AT3G01830.2

Model type: Protein coding
Short Description: Calcium-binding EF-hand family protein
Computational Description: Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: calmodulin like 37 (TAIR:AT5G42380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G01840.1

Model type: Protein coding
Short Description: Protein kinase superfamily protein
Computational Description: Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G33580.1); Has 52720 Blast hits to 52395 proteins in 2921 species: Archae - 39; Bacteria - 3156; Metazoa - 18439; Fungi - 2605; Plants - 22696; Viruses - 193; Other Eukaryotes - 5592 (source: NCBI BLink).
Link: InterPro Scan - TAIR