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11-2747-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 436398 [Map]; Strand: w
      • AT2G01940.2 - [+] show detail - C2H2-like zinc finger protein
        Distance: 1321; Region: intergenic
      • AT2G01950.1 - [+] show detail - BRI1-like 2
        Distance: 4238; Region: intergenic
    Flanking Genome Sequence: 11-2747-1 - 5-prime edge 
    TANANGANTG NCCANACGTN AANGAGANAN ACNNNGNTGG GGGCAAGTAT 
    NTAGATACAT ACNTATACGG CATACTATAG CAAAGAAAAT ATAAAATAAC 
    AAAAATAAGA CNGATCTTTT GCGTATGAGA TTGAAGAAGC TATACACTAC 
    AAAAATCTAA AATCCGAGGT GGGTTTGGTT TTTGTACATC TTTTGGGACC 
    AGTTTCGATG CAGAAATTAG GAGGATATAA AGACTTTAAT AACGAGGACT 
    TGAAGAAATG ACATGAATGT CTGTCTGAGA GAACTAAAGA AGTGGGTTAA 
    GTAAATAAGA GAGTGACAAA TGCCTGCCCG TTACTCCGTT TCAACTCTAT 
    GGCACTGAAA ACCATGACGT TTTTTTCCCG TCGCATTTAA TGTGCACTCA 
    ATTGCATTGA AAGTGACTAT TTATCTCTCT CTCTCGNNNT CATCATTTGT 
    GCTAACACGC AGAGAGGTTT GCAGATTCTG CAGCTATGTN TGTCACNTAN 
    ANAAGAGGTG GANAGAGAGA GAGAAAGAGA TGGCNTATNN GGCTTTCTNT 
    ATACCANAGG GCNANCNNNT GTGGGNGNAA TATAACGCCC GNAAATNTGG 
    NNGANNAGGG GGNNATGNAC AANNTCGNGA AANNGNNAAN NGNGNNNNGN 
    NAANAGANNN NCCNTNGGNN GANANNTNNG GNNNNNCNGN CAGGGNNNNN 
    NNANNNNGGG CNNNGANGGN AN

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 436314 [Map]; Strand: w
      • AT2G01940.2 - [+] show detail - C2H2-like zinc finger protein
        Distance: 1237; Region: intergenic
      • AT2G01950.1 - [+] show detail - BRI1-like 2
        Distance: 4322; Region: intergenic
    Flanking Genome Sequence: 11-2747-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TCACACATCA TAGACCTGTC CAATCTAAAA ATATTTGGGT TTTTTTTTAT 
    AANAAAAAAA TTCATCTAAA AAATGTTNGG CTANAAACAT GAATAATCAC 
    CATTATGTAT TAATTAANAA ATCTCAAATG GGTATATTAT ATGAATCATG 
    TGGCTTAAAC ATGTATTATC TTTGTATGAC TTGCNCACCA AATTTTATTT 
    ATCACCACAA AGTTTTCANA TGGAGTTATC TTCTTAACGC AATGTAGTCT 
    TGGGTTTCAA ATTTTATACT AANCNCNCAT GAATAATGCN CAACAATTNG 
    ATGAGNGGCT ATTTATTTAT CTCTCATGAA TATTAGGNGT TTTTAACTAT 
    CTATTTTTAA GGTCAACTAN ACTAAATACT TAATTACTTA AAATCCANCG 
    ACCAGTTCTA TATAAAATTT GATATGGACT ACTCTGAGTA TNGGTCATAT 
    GTGTGAACAG TANAATTATT TGACATGCAT TTTCTTGTAA AATTTTACTT 
    AAAATAAAAT CANAAGTCTC TGTAAAAATT TATTTCGAGA CAATAAATGA 
    GTAGCTAGAA AATTTGCTAA AAGTTGTAAT AACAACAAGG TGAAAATGGG 
    TCGGGCTGTT TTATCATCAT TATANATCAA CACTTTTTGT CCGAATCTAC 
    CGAAANATGA AACGATGTTT GTTTATGAAC CCTNGTTTTA AGTGNAACGG 
    GCNCGGACCA AACCNACCTC NTATNGNNCN TTTCCCNTCA CTCCNTTTTT 
    NAA

AT2G01940.2

Model type
Protein coding
Short Description
C2H2-like zinc finger protein
Curator Summary
May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells.
Computational Description
SHOOT GRAVITROPISM 5 (SGR5); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 14 (TAIR:AT1G68130.2); Has 5058 Blast hits to 4353 proteins in 195 species: Archae - 1; Bacteria - 0; Metazoa - 3999; Fungi - 151; Plants - 716; Viruses - 0; Other Eukaryotes - 191 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01950.1

Model type
Protein coding
Short Description
BRI1-like 2
Curator Summary
Encodes a leucine rich repeat receptor kinase and associated with provascular/procambial cells. Similar to BRI, brassinosteroid receptor protein.
Computational Description
BRI1-like 2 (BRL2); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: BRI1 like (TAIR:AT1G55610.2); Has 216585 Blast hits to 138440 proteins in 4665 species: Archae - 155; Bacteria - 20149; Metazoa - 71991; Fungi - 10737; Plants - 87183; Viruses - 376; Other Eukaryotes - 25994 (source: NCBI BLink).
Link
InterPro Scan - TAIR