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11-2752-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1145495 [Map]; Strand: c
      • AT1G04280.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 11-2752-1 - 5-prime edge 
    CNTTNAAAAA CTAACAAAAT CGGTTATACT GATAACGGTC GGTACGGGCA 
    TTTTCCCATC CTACTTTCAT CCCCGGGNNG ATTGNNNTAN ANNNCAANAT 
    TCCTCNAATN ACCANCCCGG GNCGANGACC GCGCNTGNCN TNTACCATTA 
    GNCGATCTCC AATAATGTGT ATGAATAATA AATATTATCC TATAACACAA 
    AATGACAGGC TTTAAGCGAT GAGTCGGATC AGAAAGTTCC AAAACTCAAG 
    GATTTCGTGA TGGCAGCAAC AAGGTGATTG ATTGTTCCAT ATCCATGACT 
    TTATATATGC ATACCTATAG TTACATACAT ATAAATTGCG TTACCCGTAA 
    TCGTCGTTGC GTAATGATTC CAACTAACTG TACCAAGCGT AACATATAAT 
    GTAGAACTGA CTATTAATCT ATAACTATTA ACAAACATTG TAGAACTAAT 
    TAATGGCTTT GTTAATAATG TAGGAAACAG AGGTTTGAGA GAGTAACAAA 
    AGATCTCAAG GTGAAAAGGG TAATTTCGAC ATTAGTAGAA GAGATGAGAG 
    TCATTGGGAG CGGAAGCAGT GAGCCACACT GTACGGAAGT AATGTCTCCG 
    GTGGCTCATA ACAAACGAAG TCCCGTCCTT CTCCTTATNG GGCGGAGGAA 
    TGGGCGCAGG AAANAGCACC CGTCCTCAAA GATATNTTTC CTANAGTATA 
    ACTCTTTTTT CTTGGGATTT NTTTAACATA TGGGGGGTTA NAGNCTCTTA 
    AATCTTTCTT AAANAACCAG AAATAATATT TTGTANGGTN GTTTGGTCGG 
    AGGCCAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1145506 [Map]; Strand: c
      • AT1G04280.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-2752-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACTTTAAG TACCTGAGAG 
    ATGAGGTTGG AAGATTGGGT CCAATTGAAA GAAAAATAAG TGAGAATGCA 
    TCTATCAAAT TCTTCAAGGA GATGAACATA GAGAGAATCA CGCTCAGCTT 
    CATTCTCCAA ATACTCATCC ACATTCTCAT CATACCCTTT TGTTTTCAAC 
    AAATATCCAT TTGCTAATTT GCATAGTTGT GGGTATTCAT TTGGATC

AT1G04280.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cell killing; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Zeta toxin (InterPro:IPR010488); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G06750.2); Has 195 Blast hits to 194 proteins in 47 species: Archae - 0; Bacteria - 42; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 3; Other Eukaryotes - 20 (source: NCBI BLink).
Link
InterPro Scan - TAIR