1. Home
  2. Mutant Lines
  3. 11-2776-1

11-2776-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 925206 [Map]; Strand: w
      • AT1G03720.1 - [+] show detail - Cysteine proteinases superfamily protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 11-2776-1 - 5-prime edge 
    TAGCCGACAA TGAGAACTAC GTGTCCCCCT GCATCNTCAT CTTCCATGTC 
    TACGCCGCTT ACATTGTAGA TACTCTGAAA GCAATAAAAA AAATTTAGTT 
    AGTTGATCCA GGTAATTACN TTGTATCACA GAGAGACATA TATACCAATC 
    CATTTGACTT CTTACTAACA TTGCCAATGA ACTGGAAATT GTGAGTTATA 
    TCAAACGCTA TGGCAACCGG AGAGATATCA ACTTTGGACT TGATGAAATC 
    CTTTGAAGGA CATTTCTCCA TGGAAAAGTT CCACTTGGTA TGATGTCCAA 
    TATCGCTCCC AGCCTCCATT CAAGTCATAA AAAATGAAAC TAATTAGTTT 
    GTCACAAACC CAAAAAGAAG TGTATCTTAA AACAAAGTAC TAGGTGATAT 
    TCGAATTACA AGTAGTACCT TCGACTTCGA TTATCTTTTT TTTAGCAACC 
    CCTTAACTGC TATGTGATNA ATAGCATCTT TAAGGTTCTT AAGTTTNATC 
    NACCCCGGTC GTTTGCCTCG AGTTTTTTCA TCTTCAAATG CACGACGNGG 
    TCATCATGAT CGAATCTTAG GCGGCCAGCT ATGTACTCTT GAGTTATATT 
    GTAAATGACT TGCAAAANAC GTGTCAATGC GATGGCACN

AT1G03720.1

Model type
Protein coding
Short Description
Cysteine proteinases superfamily protein
Computational Description
Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: ovule, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Peptidase C1A, papain C-terminal (InterPro:IPR000668); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT5G17080.1); Has 2156 Blast hits to 2154 proteins in 385 species: Archae - 2; Bacteria - 56; Metazoa - 1002; Fungi - 0; Plants - 537; Viruses - 67; Other Eukaryotes - 492 (source: NCBI BLink).
Link
InterPro Scan - TAIR